Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Gm43822-201ENSMUST00000200285 476 ntBASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Gm10312-201ENSMUST00000078515 489 ntBASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa3Q9CQ71 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Gm23270-201ENSMUST00000104055 131 ntBASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Gm14723-201ENSMUST00000118686 215 ntBASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa3Q9CQ71 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Gm23912-201ENSMUST00000104687 87 ntBASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Gm38341-201ENSMUST00000195357 515 ntBASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Gm8712-201ENSMUST00000221090 701 ntBASIC12.91□□□□□ -0.34
Rpa3Q9CQ71 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms