Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm10434-201ENSMUST00000101158 471 ntBASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm14999-201ENSMUST00000121039 624 ntBASIC10.24□□□□□ -0.77
H1fooQ8VIK3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm42599-201ENSMUST00000201308 469 ntBASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Gm22018-201ENSMUST00000104357 131 ntBASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Mir1247-201ENSMUST00000116706 82 ntBASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Gm12058-201ENSMUST00000118614 437 ntBASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.23□□□□□ -0.77
H1fooQ8VIK3 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
H1fooQ8VIK3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.22□□□□□ -0.77
H1fooQ8VIK3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms