Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.09□□□□□ -0.31
TraipQ8VIG6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.09□□□□□ -0.31
TraipQ8VIG6 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.09□□□□□ -0.31
TraipQ8VIG6 AC155266.1-201ENSMUST00000220762 904 ntBASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gm6562-201ENSMUST00000221903 464 ntBASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gm26448-201ENSMUST00000082446 203 ntBASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gm26226-201ENSMUST00000082509 116 ntBASIC13.09□□□□□ -0.31
TraipQ8VIG6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TraipQ8VIG6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TraipQ8VIG6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TraipQ8VIG6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TraipQ8VIG6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
TraipQ8VIG6 Gm10764-202ENSMUST00000220397 2335 ntBASIC13.08□□□□□ -0.31
TraipQ8VIG6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
TraipQ8VIG6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
TraipQ8VIG6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Gm9062-201ENSMUST00000117712 727 ntBASIC13.08□□□□□ -0.32
TraipQ8VIG6 Gm15515-201ENSMUST00000117827 822 ntBASIC13.08□□□□□ -0.32
TraipQ8VIG6 Gm11331-201ENSMUST00000119764 288 ntBASIC13.08□□□□□ -0.32
TraipQ8VIG6 Gm12196-201ENSMUST00000120954 262 ntBASIC13.08□□□□□ -0.32
TraipQ8VIG6 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.08□□□□□ -0.32
TraipQ8VIG6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.08□□□□□ -0.32
TraipQ8VIG6 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC13.08□□□□□ -0.32
TraipQ8VIG6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Gm8956-201ENSMUST00000203939 825 ntBASIC13.08□□□□□ -0.32
TraipQ8VIG6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TraipQ8VIG6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Gm7722-201ENSMUST00000120646 741 ntBASIC13.07□□□□□ -0.32
TraipQ8VIG6 Gm12164-201ENSMUST00000121695 551 ntBASIC13.07□□□□□ -0.32
TraipQ8VIG6 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Gm3332-201ENSMUST00000189337 928 ntBASIC13.07□□□□□ -0.32
TraipQ8VIG6 Gm42997-202ENSMUST00000200321 985 ntBASIC13.07□□□□□ -0.32
TraipQ8VIG6 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC13.07□□□□□ -0.32
TraipQ8VIG6 Gm45359-201ENSMUST00000210635 427 ntBASIC13.07□□□□□ -0.32
TraipQ8VIG6 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Spcs1-203ENSMUST00000226374 592 ntBASIC13.07□□□□□ -0.32
TraipQ8VIG6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.07□□□□□ -0.32
TraipQ8VIG6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TraipQ8VIG6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms