Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rnf8Q8VC56 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Gm27390-201ENSMUST00000184516 176 ntBASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Gm18584-201ENSMUST00000203098 964 ntBASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Gm32025-201ENSMUST00000217960 307 ntBASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.82□□□□□ -0.52
Rnf8Q8VC56 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf8Q8VC56 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm43630-201ENSMUST00000201550 776 ntBASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm6013-201ENSMUST00000212264 699 ntBASIC11.81□□□□□ -0.52
Rnf8Q8VC56 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gm5781-201ENSMUST00000219792 443 ntBASIC11.81□□□□□ -0.52
Rnf8Q8VC56 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.81□□□□□ -0.52
Rnf8Q8VC56 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf8Q8VC56 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms