Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Snord83b-201ENSMUST00000104546 94 ntBASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Gm8099-201ENSMUST00000200510 742 ntBASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Gm20949-201ENSMUST00000206478 952 ntBASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Gm7730-201ENSMUST00000212486 454 ntBASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Gm6983-201ENSMUST00000214912 628 ntBASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf4Q8K4J2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Rmrp-201ENSMUST00000157463 271 ntBASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf4Q8K4J2 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms