Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc38Q8CDN8 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc38Q8CDN8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gm24830-201ENSMUST00000102024 166 ntBASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gm15824-201ENSMUST00000119516 955 ntBASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gm13875-201ENSMUST00000120162 282 ntBASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gm14999-201ENSMUST00000121039 624 ntBASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gm27023-201ENSMUST00000182372 285 ntBASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gm37201-201ENSMUST00000191845 523 ntBASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gm26232-201ENSMUST00000083360 166 ntBASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc38Q8CDN8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Mir1247-201ENSMUST00000116706 82 ntBASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Gm13570-201ENSMUST00000140763 309 ntBASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Gm37008-201ENSMUST00000195712 319 ntBASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc38Q8CDN8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc38Q8CDN8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc38Q8CDN8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc38Q8CDN8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms