Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc87Q8CDL9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Gm23931-201ENSMUST00000103842 109 ntBASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Gm37008-201ENSMUST00000195712 319 ntBASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Gm45880-201ENSMUST00000213041 853 ntBASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc87Q8CDL9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc87Q8CDL9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Gm25927-201ENSMUST00000175058 117 ntBASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Gm9022-201ENSMUST00000182482 992 ntBASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Gm4034-201ENSMUST00000187674 480 ntBASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Gm38092-201ENSMUST00000195600 653 ntBASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Gm42693-201ENSMUST00000196779 631 ntBASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Gm32025-201ENSMUST00000217960 307 ntBASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.95□□□□□ -0.34
Ccdc87Q8CDL9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms