Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Tsen54Q8C2A2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Mir1894-201ENSMUST00000122802 81 ntBASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm6244-201ENSMUST00000178732 841 ntBASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm7287-201ENSMUST00000205267 602 ntBASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm26315-201ENSMUST00000083890 321 ntBASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tsen54Q8C2A2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Cog3-203ENSMUST00000227473 4197 ntBASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Gm29608-201ENSMUST00000190444 463 ntBASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Gm18473-201ENSMUST00000220543 868 ntBASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.23□□□□□ -0.77
Tsen54Q8C2A2 Itm2b-204ENSMUST00000228637 783 ntBASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms