Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Gm18041-201ENSMUST00000218210 618 ntBASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upf3aQ3ULJ3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Gm5419-201ENSMUST00000119301 527 ntBASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Gm9463-201ENSMUST00000206707 601 ntBASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3aQ3ULJ3 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.83□□□□□ -0.35
Upf3aQ3ULJ3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upf3aQ3ULJ3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upf3aQ3ULJ3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upf3aQ3ULJ3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Gm13263-201ENSMUST00000121271 838 ntBASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Gm4726-201ENSMUST00000135604 736 ntBASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Gm7666-201ENSMUST00000146631 819 ntBASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Gm6019-201ENSMUST00000148369 736 ntBASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.83□□□□□ -0.36
Upf3aQ3ULJ3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms