Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Gm14277-201ENSMUST00000121195 360 ntBASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Gm24845-201ENSMUST00000158034 109 ntBASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Gzmn-202ENSMUST00000225535 989 ntBASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkl4Q3TZA2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Gm25700-201ENSMUST00000177693 110 ntBASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Gm2260-201ENSMUST00000184965 657 ntBASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Gm4034-201ENSMUST00000187674 480 ntBASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Cdkl4Q3TZA2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Gm5070-201ENSMUST00000177599 862 ntBASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Gm42937-201ENSMUST00000197360 752 ntBASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdkl4Q3TZA2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms