Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cul4aQ3TCH7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Gm9136-201ENSMUST00000193368 454 ntBASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cul4aQ3TCH7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Gm13875-201ENSMUST00000120162 282 ntBASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Gm14247-201ENSMUST00000120950 237 ntBASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Gm13316-201ENSMUST00000140537 691 ntBASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Gm27023-201ENSMUST00000182372 285 ntBASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Gm37201-201ENSMUST00000191845 523 ntBASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cul4aQ3TCH7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cul4aQ3TCH7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms