Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-3P97334 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkx2-3P97334 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC15.27■□□□□ 0.04
Nkx2-3P97334 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC15.27■□□□□ 0.04
Nkx2-3P97334 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.27■□□□□ 0.03
Nkx2-3P97334 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-3P97334 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-3P97334 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-3P97334 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-3P97334 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-3P97334 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.27■□□□□ 0.03
Nkx2-3P97334 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-3P97334 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nkx2-3P97334 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-3P97334 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Nkx2-3P97334 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.26■□□□□ 0.03
Nkx2-3P97334 Gm23045-201ENSMUST00000175041 96 ntBASIC15.26■□□□□ 0.03
Nkx2-3P97334 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.26■□□□□ 0.03
Nkx2-3P97334 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Gm45113-201ENSMUST00000207518 165 ntBASIC15.26■□□□□ 0.03
Nkx2-3P97334 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Nkx2-3P97334 Gm14132-201ENSMUST00000117188 1719 ntBASIC15.26■□□□□ 0.03
Nkx2-3P97334 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Gm23153-201ENSMUST00000175323 313 ntBASIC15.25■□□□□ 0.03
Nkx2-3P97334 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Gm9192-201ENSMUST00000183221 985 ntBASIC15.25■□□□□ 0.03
Nkx2-3P97334 Gm43371-201ENSMUST00000202838 1031 ntBASIC15.25■□□□□ 0.03
Nkx2-3P97334 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Gm6430-201ENSMUST00000054664 1248 ntBASIC15.25■□□□□ 0.03
Nkx2-3P97334 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
Nkx2-3P97334 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 AC154849.3-201ENSMUST00000223733 1660 ntBASIC15.25■□□□□ 0.03
Nkx2-3P97334 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx2-3P97334 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.25■□□□□ 0.03
Nkx2-3P97334 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx2-3P97334 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms