Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nup43P59235 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Nup43P59235 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nup43P59235 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nup43P59235 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nup43P59235 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.54□□□□□ -0.56
Nup43P59235 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.54□□□□□ -0.56
Nup43P59235 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nup43P59235 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nup43P59235 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Gm14644-201ENSMUST00000116671 647 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nup43P59235 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Gm15276-201ENSMUST00000145953 498 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Gm6963-201ENSMUST00000147879 379 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nup43P59235 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Gm9230-201ENSMUST00000188228 532 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Gm13097-201ENSMUST00000210722 397 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Gm6082-201ENSMUST00000215204 454 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Gm19994-201ENSMUST00000217086 586 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.54□□□□□ -0.56
Nup43P59235 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nup43P59235 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Gzmn-202ENSMUST00000225535 989 ntBASIC11.54□□□□□ -0.56
Nup43P59235 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.54□□□□□ -0.56
Nup43P59235 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nup43P59235 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.54□□□□□ -0.56
Nup43P59235 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nup43P59235 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nup43P59235 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.54□□□□□ -0.56
Nup43P59235 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.54□□□□□ -0.56
Nup43P59235 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nup43P59235 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Nup43P59235 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup43P59235 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nup43P59235 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Nup43P59235 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup43P59235 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
Nup43P59235 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.53□□□□□ -0.56
Nup43P59235 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup43P59235 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup43P59235 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup43P59235 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.53□□□□□ -0.56
Nup43P59235 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup43P59235 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.53□□□□□ -0.56
Nup43P59235 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nup43P59235 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.53□□□□□ -0.56
Nup43P59235 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.53□□□□□ -0.56
Nup43P59235 Rprl1-201ENSMUST00000158050 327 ntBASIC11.53□□□□□ -0.56
Nup43P59235 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.53□□□□□ -0.56
Nup43P59235 Gm18711-201ENSMUST00000199341 750 ntBASIC11.53□□□□□ -0.56
Nup43P59235 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.53□□□□□ -0.56
Nup43P59235 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.53□□□□□ -0.56
Nup43P59235 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.53□□□□□ -0.56
Nup43P59235 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.53□□□□□ -0.56
Nup43P59235 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.53□□□□□ -0.56
Nup43P59235 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.53□□□□□ -0.56
Nup43P59235 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup43P59235 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup43P59235 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup43P59235 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.53□□□□□ -0.56
Nup43P59235 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nup43P59235 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms