Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox3P53784 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
Sox3P53784 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.75□□□□□ -0.53
Sox3P53784 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.75□□□□□ -0.53
Sox3P53784 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox3P53784 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox3P53784 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Sox3P53784 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.74□□□□□ -0.53
Sox3P53784 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox3P53784 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sox3P53784 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sox3P53784 Gm9540-201ENSMUST00000188230 478 ntBASIC11.74□□□□□ -0.53
Sox3P53784 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox3P53784 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.74□□□□□ -0.53
Sox3P53784 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox3P53784 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox3P53784 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sox3P53784 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
Sox3P53784 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sox3P53784 Gm10179-201ENSMUST00000086233 688 ntBASIC11.74□□□□□ -0.53
Sox3P53784 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sox3P53784 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox3P53784 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sox3P53784 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.74□□□□□ -0.53
Sox3P53784 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.74□□□□□ -0.53
Sox3P53784 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.74□□□□□ -0.53
Sox3P53784 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sox3P53784 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.74□□□□□ -0.53
Sox3P53784 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sox3P53784 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox3P53784 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sox3P53784 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sox3P53784 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox3P53784 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Gm13875-201ENSMUST00000120162 282 ntBASIC11.73□□□□□ -0.53
Sox3P53784 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.73□□□□□ -0.53
Sox3P53784 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sox3P53784 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.73□□□□□ -0.53
Sox3P53784 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.73□□□□□ -0.53
Sox3P53784 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sox3P53784 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
Sox3P53784 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.73□□□□□ -0.53
Sox3P53784 Gm44651-201ENSMUST00000207343 372 ntBASIC11.73□□□□□ -0.53
Sox3P53784 Gm45433-201ENSMUST00000209386 247 ntBASIC11.73□□□□□ -0.53
Sox3P53784 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.73□□□□□ -0.53
Sox3P53784 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.73□□□□□ -0.53
Sox3P53784 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sox3P53784 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sox3P53784 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox3P53784 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sox3P53784 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sox3P53784 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox3P53784 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms