Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox1P53783 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sox1P53783 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sox1P53783 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.47□□□□□ -0.41
Sox1P53783 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.47□□□□□ -0.41
Sox1P53783 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox1P53783 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox1P53783 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.47□□□□□ -0.41
Sox1P53783 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Gm29499-201ENSMUST00000189151 486 ntBASIC12.47□□□□□ -0.41
Sox1P53783 Gm28329-201ENSMUST00000191208 689 ntBASIC12.47□□□□□ -0.41
Sox1P53783 Gm29171-201ENSMUST00000191397 486 ntBASIC12.47□□□□□ -0.41
Sox1P53783 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.47□□□□□ -0.41
Sox1P53783 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC12.47□□□□□ -0.41
Sox1P53783 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox1P53783 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox1P53783 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Sox1P53783 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.46□□□□□ -0.41
Sox1P53783 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sox1P53783 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sox1P53783 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.46□□□□□ -0.41
Sox1P53783 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.46□□□□□ -0.41
Sox1P53783 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.46□□□□□ -0.41
Sox1P53783 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox1P53783 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox1P53783 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.46□□□□□ -0.41
Sox1P53783 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sox1P53783 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox1P53783 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox1P53783 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.46□□□□□ -0.41
Sox1P53783 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sox1P53783 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox1P53783 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox1P53783 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Sox1P53783 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sox1P53783 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox1P53783 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sox1P53783 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox1P53783 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sox1P53783 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.46□□□□□ -0.42
Sox1P53783 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sox1P53783 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sox1P53783 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.46□□□□□ -0.42
Sox1P53783 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox1P53783 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sox1P53783 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox1P53783 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms