Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.84□□□□□ -0.35
Rfx2P48379 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.84□□□□□ -0.35
Rfx2P48379 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rfx2P48379 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rfx2P48379 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rfx2P48379 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rfx2P48379 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rfx2P48379 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rfx2P48379 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.83□□□□□ -0.36
Rfx2P48379 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rfx2P48379 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rfx2P48379 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Gm13996-201ENSMUST00000118456 430 ntBASIC12.83□□□□□ -0.36
Rfx2P48379 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.83□□□□□ -0.36
Rfx2P48379 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Rfx2P48379 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Rfx2P48379 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.83□□□□□ -0.36
Rfx2P48379 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.83□□□□□ -0.36
Rfx2P48379 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.83□□□□□ -0.36
Rfx2P48379 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.83□□□□□ -0.36
Rfx2P48379 Nsd1-205ENSMUST00000224693 852 ntBASIC12.83□□□□□ -0.36
Rfx2P48379 Gm8385-201ENSMUST00000058999 643 ntBASIC12.83□□□□□ -0.36
Rfx2P48379 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rfx2P48379 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Rfx2P48379 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.83□□□□□ -0.36
Rfx2P48379 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.83□□□□□ -0.36
Rfx2P48379 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rfx2P48379 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.83□□□□□ -0.36
Rfx2P48379 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rfx2P48379 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rfx2P48379 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.82□□□□□ -0.36
Rfx2P48379 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.82□□□□□ -0.36
Rfx2P48379 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rfx2P48379 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rfx2P48379 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rfx2P48379 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.82□□□□□ -0.36
Rfx2P48379 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Rfx2P48379 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.82□□□□□ -0.36
Rfx2P48379 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Rfx2P48379 Gm12015-201ENSMUST00000117065 843 ntBASIC12.82□□□□□ -0.36
Rfx2P48379 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.82□□□□□ -0.36
Rfx2P48379 Gm5070-201ENSMUST00000177599 862 ntBASIC12.82□□□□□ -0.36
Rfx2P48379 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.82□□□□□ -0.36
Rfx2P48379 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.82□□□□□ -0.36
Rfx2P48379 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.82□□□□□ -0.36
Rfx2P48379 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.82□□□□□ -0.36
Rfx2P48379 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Gzmn-202ENSMUST00000225535 989 ntBASIC12.82□□□□□ -0.36
Rfx2P48379 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.82□□□□□ -0.36
Rfx2P48379 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rfx2P48379 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms