Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
LdlrP35951 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Gm24255-201ENSMUST00000104481 128 ntBASIC12.17□□□□□ -0.46
LdlrP35951 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.17□□□□□ -0.46
LdlrP35951 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
LdlrP35951 Mir5132-201ENSMUST00000175166 71 ntBASIC12.17□□□□□ -0.46
LdlrP35951 Gm9022-201ENSMUST00000182482 992 ntBASIC12.17□□□□□ -0.46
LdlrP35951 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.17□□□□□ -0.46
LdlrP35951 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LdlrP35951 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.17□□□□□ -0.46
LdlrP35951 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.17□□□□□ -0.46
LdlrP35951 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.17□□□□□ -0.46
LdlrP35951 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LdlrP35951 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.17□□□□□ -0.46
LdlrP35951 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.17□□□□□ -0.46
LdlrP35951 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LdlrP35951 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.16□□□□□ -0.46
LdlrP35951 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.16□□□□□ -0.46
LdlrP35951 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.16□□□□□ -0.46
LdlrP35951 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.16□□□□□ -0.46
LdlrP35951 Gm11964-201ENSMUST00000120982 444 ntBASIC12.16□□□□□ -0.46
LdlrP35951 Gm12363-201ENSMUST00000122250 668 ntBASIC12.16□□□□□ -0.46
LdlrP35951 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.16□□□□□ -0.46
LdlrP35951 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.16□□□□□ -0.46
LdlrP35951 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LdlrP35951 Mir7070-201ENSMUST00000183657 86 ntBASIC12.16□□□□□ -0.46
LdlrP35951 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.16□□□□□ -0.46
LdlrP35951 Gm27320-201ENSMUST00000184892 109 ntBASIC12.16□□□□□ -0.46
LdlrP35951 Gm18753-201ENSMUST00000201000 566 ntBASIC12.16□□□□□ -0.46
LdlrP35951 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.16□□□□□ -0.46
LdlrP35951 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.16□□□□□ -0.46
LdlrP35951 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Gm10146-201ENSMUST00000072739 309 ntBASIC12.16□□□□□ -0.46
LdlrP35951 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.16□□□□□ -0.46
LdlrP35951 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LdlrP35951 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
LdlrP35951 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.16□□□□□ -0.46
LdlrP35951 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LdlrP35951 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LdlrP35951 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.16□□□□□ -0.46
LdlrP35951 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LdlrP35951 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LdlrP35951 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LdlrP35951 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LdlrP35951 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LdlrP35951 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LdlrP35951 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LdlrP35951 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LdlrP35951 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LdlrP35951 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.15□□□□□ -0.46
LdlrP35951 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LdlrP35951 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms