Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.75□□□□□ -0.53
BdnfP21237 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
BdnfP21237 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
BdnfP21237 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.75□□□□□ -0.53
BdnfP21237 Gm9022-201ENSMUST00000182482 992 ntBASIC11.75□□□□□ -0.53
BdnfP21237 Gm38092-201ENSMUST00000195600 653 ntBASIC11.75□□□□□ -0.53
BdnfP21237 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
BdnfP21237 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.75□□□□□ -0.53
BdnfP21237 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
BdnfP21237 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.75□□□□□ -0.53
BdnfP21237 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
BdnfP21237 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
BdnfP21237 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
BdnfP21237 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.75□□□□□ -0.53
BdnfP21237 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.75□□□□□ -0.53
BdnfP21237 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BdnfP21237 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.74□□□□□ -0.53
BdnfP21237 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.74□□□□□ -0.53
BdnfP21237 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
BdnfP21237 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.74□□□□□ -0.53
BdnfP21237 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.74□□□□□ -0.53
BdnfP21237 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.74□□□□□ -0.53
BdnfP21237 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.74□□□□□ -0.53
BdnfP21237 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.74□□□□□ -0.53
BdnfP21237 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.74□□□□□ -0.53
BdnfP21237 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Gm10268-201ENSMUST00000085340 555 ntBASIC11.74□□□□□ -0.53
BdnfP21237 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.74□□□□□ -0.53
BdnfP21237 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.74□□□□□ -0.53
BdnfP21237 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.74□□□□□ -0.53
BdnfP21237 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
BdnfP21237 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.74□□□□□ -0.53
BdnfP21237 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
BdnfP21237 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
BdnfP21237 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
BdnfP21237 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
BdnfP21237 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.73□□□□□ -0.53
BdnfP21237 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
BdnfP21237 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
BdnfP21237 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
BdnfP21237 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BdnfP21237 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms