Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.91□□□□□ -0.66
P06344 Gm13296-201ENSMUST00000117854 997 ntBASIC10.91□□□□□ -0.66
P06344 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.91□□□□□ -0.66
P06344 Gm14017-201ENSMUST00000121934 386 ntBASIC10.91□□□□□ -0.66
P06344 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.91□□□□□ -0.66
P06344 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.91□□□□□ -0.66
P06344 Gm45186-201ENSMUST00000206874 478 ntBASIC10.91□□□□□ -0.66
P06344 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.91□□□□□ -0.66
P06344 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.91□□□□□ -0.66
P06344 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.91□□□□□ -0.66
P06344 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Gm9996-201ENSMUST00000070359 913 ntBASIC10.91□□□□□ -0.66
P06344 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
P06344 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
P06344 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.91□□□□□ -0.66
P06344 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
P06344 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
P06344 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.91□□□□□ -0.66
P06344 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.9□□□□□ -0.66
P06344 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Gm14644-201ENSMUST00000116671 647 ntBASIC10.9□□□□□ -0.66
P06344 Gm12997-201ENSMUST00000120207 640 ntBASIC10.9□□□□□ -0.66
P06344 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.9□□□□□ -0.66
P06344 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Gm9230-201ENSMUST00000188228 532 ntBASIC10.9□□□□□ -0.66
P06344 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Gm44262-201ENSMUST00000204969 372 ntBASIC10.9□□□□□ -0.66
P06344 Gm19994-201ENSMUST00000217086 586 ntBASIC10.9□□□□□ -0.66
P06344 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.9□□□□□ -0.66
P06344 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.9□□□□□ -0.66
P06344 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
P06344 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
P06344 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
P06344 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.9□□□□□ -0.66
P06344 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P06344 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
P06344 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P06344 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P06344 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P06344 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
P06344 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.89□□□□□ -0.67
P06344 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
P06344 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P06344 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.89□□□□□ -0.67
P06344 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P06344 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
P06344 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.89□□□□□ -0.67
P06344 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
P06344 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P06344 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P06344 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.89□□□□□ -0.67
P06344 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms