Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm24934-201ENSMUST00000103764 111 ntBASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm23931-201ENSMUST00000103842 109 ntBASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm12058-201ENSMUST00000118614 437 ntBASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm37201-201ENSMUST00000191845 523 ntBASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh9F8VPK8 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Gm23912-201ENSMUST00000104687 87 ntBASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Mir7085-201ENSMUST00000184353 66 ntBASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Gm37008-201ENSMUST00000195712 319 ntBASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh9F8VPK8 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh9F8VPK8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms