Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Mir1249-201ENSMUST00000116791 98 ntBASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Gm8643-201ENSMUST00000195228 625 ntBASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Gm17825-201ENSMUST00000206836 794 ntBASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Rce1-203ENSMUST00000224707 1255 ntBASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a3E9PWQ3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gm44658-201ENSMUST00000207965 637 ntBASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gm42751-201ENSMUST00000198065 559 ntBASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gm44173-201ENSMUST00000204316 132 ntBASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gm44908-201ENSMUST00000208610 266 ntBASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gm43103-201ENSMUST00000199021 802 ntBASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC11.82□□□□□ -0.52
Col6a3E9PWQ3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Gm19931-201ENSMUST00000198920 368 ntBASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Gm4903-201ENSMUST00000210462 405 ntBASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Gm16418-201ENSMUST00000118577 171 ntBASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a3E9PWQ3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm17221-201ENSMUST00000163909 481 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Gm17073-201ENSMUST00000168069 556 ntBASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col6a3E9PWQ3 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms