Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Gm37613-201ENSMUST00000195677 3580 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Gm44826-201ENSMUST00000207648 2332 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Gm15240-201ENSMUST00000118156 720 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Gm13813-201ENSMUST00000120998 787 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Gm14767-201ENSMUST00000121559 586 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Gm14822-201ENSMUST00000122247 291 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Gm29608-201ENSMUST00000190444 463 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Ighv1-60-201ENSMUST00000195816 405 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 CT943659.1-201ENSMUST00000215459 326 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trav8-1A0A075B641 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 AC096628.2-201ENSMUST00000225443 1413 ntBASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Gm7336-201ENSMUST00000107041 1232 ntBASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Gm38144-201ENSMUST00000192790 465 ntBASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 AW822252-206ENSMUST00000208904 237 ntBASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Gm17795-201ENSMUST00000214505 757 ntBASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 AC154846.1-201ENSMUST00000226278 862 ntBASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Gm42141-201ENSMUST00000196534 2172 ntBASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Gm45776-201ENSMUST00000212366 1522 ntBASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trav8-1A0A075B641 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 166.6 ms