Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps29Q9QZ88 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.91■□□□□ 0.78
Vps29Q9QZ88 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps29Q9QZ88 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps29Q9QZ88 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps29Q9QZ88 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps29Q9QZ88 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Vps29Q9QZ88 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Vps29Q9QZ88 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps29Q9QZ88 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vps29Q9QZ88 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Vps29Q9QZ88 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Gm13238-201ENSMUST00000117655 780 ntBASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Gm43566-201ENSMUST00000196851 808 ntBASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
Vps29Q9QZ88 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Vps29Q9QZ88 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.85■□□□□ 0.77
Vps29Q9QZ88 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps29Q9QZ88 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps29Q9QZ88 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vps29Q9QZ88 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps29Q9QZ88 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps29Q9QZ88 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps29Q9QZ88 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps29Q9QZ88 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.85■□□□□ 0.77
Vps29Q9QZ88 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps29Q9QZ88 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps29Q9QZ88 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps29Q9QZ88 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Vps29Q9QZ88 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Vps29Q9QZ88 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps29Q9QZ88 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Vps29Q9QZ88 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.84■□□□□ 0.77
Vps29Q9QZ88 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps29Q9QZ88 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps29Q9QZ88 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps29Q9QZ88 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps29Q9QZ88 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps29Q9QZ88 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps29Q9QZ88 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps29Q9QZ88 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps29Q9QZ88 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vps29Q9QZ88 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Vps29Q9QZ88 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.83■□□□□ 0.76
Vps29Q9QZ88 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps29Q9QZ88 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps29Q9QZ88 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Vps29Q9QZ88 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps29Q9QZ88 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps29Q9QZ88 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps29Q9QZ88 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps29Q9QZ88 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps29Q9QZ88 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps29Q9QZ88 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps29Q9QZ88 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms