Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sec61a2Q9JLR1 Gm5812-201ENSMUST00000061073 957 ntBASIC18.62■□□□□ 0.57
Sec61a2Q9JLR1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sec61a2Q9JLR1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sec61a2Q9JLR1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sec61a2Q9JLR1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sec61a2Q9JLR1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sec61a2Q9JLR1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sec61a2Q9JLR1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sec61a2Q9JLR1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sec61a2Q9JLR1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sec61a2Q9JLR1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sec61a2Q9JLR1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sec61a2Q9JLR1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a2Q9JLR1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.6■□□□□ 0.57
Sec61a2Q9JLR1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a2Q9JLR1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a2Q9JLR1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a2Q9JLR1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.6■□□□□ 0.57
Sec61a2Q9JLR1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a2Q9JLR1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sec61a2Q9JLR1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a2Q9JLR1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a2Q9JLR1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sec61a2Q9JLR1 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.59■□□□□ 0.57
Sec61a2Q9JLR1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sec61a2Q9JLR1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.59■□□□□ 0.57
Sec61a2Q9JLR1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.59■□□□□ 0.57
Sec61a2Q9JLR1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.59■□□□□ 0.57
Sec61a2Q9JLR1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sec61a2Q9JLR1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sec61a2Q9JLR1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sec61a2Q9JLR1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sec61a2Q9JLR1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.58■□□□□ 0.57
Sec61a2Q9JLR1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sec61a2Q9JLR1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sec61a2Q9JLR1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sec61a2Q9JLR1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Sec61a2Q9JLR1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sec61a2Q9JLR1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.58■□□□□ 0.56
Sec61a2Q9JLR1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.58■□□□□ 0.56
Sec61a2Q9JLR1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sec61a2Q9JLR1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sec61a2Q9JLR1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sec61a2Q9JLR1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sec61a2Q9JLR1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Notumos-201ENSMUST00000151998 2659 ntBASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sec61a2Q9JLR1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sec61a2Q9JLR1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sec61a2Q9JLR1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sec61a2Q9JLR1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sec61a2Q9JLR1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.54■□□□□ 0.56
Sec61a2Q9JLR1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sec61a2Q9JLR1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sec61a2Q9JLR1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sec61a2Q9JLR1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sec61a2Q9JLR1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sec61a2Q9JLR1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sec61a2Q9JLR1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sec61a2Q9JLR1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms