Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RtcAQ9D7H3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RtcAQ9D7H3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.31■□□□□ 0.84
RtcAQ9D7H3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RtcAQ9D7H3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RtcAQ9D7H3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.3■□□□□ 0.84
RtcAQ9D7H3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.3■□□□□ 0.84
RtcAQ9D7H3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RtcAQ9D7H3 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.29■□□□□ 0.84
RtcAQ9D7H3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.29■□□□□ 0.84
RtcAQ9D7H3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.29■□□□□ 0.84
RtcAQ9D7H3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.29■□□□□ 0.84
RtcAQ9D7H3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RtcAQ9D7H3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RtcAQ9D7H3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RtcAQ9D7H3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.28■□□□□ 0.84
RtcAQ9D7H3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RtcAQ9D7H3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.28■□□□□ 0.84
RtcAQ9D7H3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RtcAQ9D7H3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RtcAQ9D7H3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RtcAQ9D7H3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RtcAQ9D7H3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcAQ9D7H3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcAQ9D7H3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcAQ9D7H3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.27■□□□□ 0.84
RtcAQ9D7H3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.27■□□□□ 0.84
RtcAQ9D7H3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RtcAQ9D7H3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RtcAQ9D7H3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
RtcAQ9D7H3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RtcAQ9D7H3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RtcAQ9D7H3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.26■□□□□ 0.83
RtcAQ9D7H3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.26■□□□□ 0.83
RtcAQ9D7H3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.26■□□□□ 0.83
RtcAQ9D7H3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RtcAQ9D7H3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RtcAQ9D7H3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RtcAQ9D7H3 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.25■□□□□ 0.83
RtcAQ9D7H3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
RtcAQ9D7H3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcAQ9D7H3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcAQ9D7H3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RtcAQ9D7H3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcAQ9D7H3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.25■□□□□ 0.83
RtcAQ9D7H3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcAQ9D7H3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcAQ9D7H3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RtcAQ9D7H3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RtcAQ9D7H3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.25■□□□□ 0.83
RtcAQ9D7H3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
RtcAQ9D7H3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcAQ9D7H3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.24■□□□□ 0.83
RtcAQ9D7H3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.24■□□□□ 0.83
RtcAQ9D7H3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.24■□□□□ 0.83
RtcAQ9D7H3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcAQ9D7H3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RtcAQ9D7H3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RtcAQ9D7H3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RtcAQ9D7H3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcAQ9D7H3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RtcAQ9D7H3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RtcAQ9D7H3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RtcAQ9D7H3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RtcAQ9D7H3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RtcAQ9D7H3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RtcAQ9D7H3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RtcAQ9D7H3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RtcAQ9D7H3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RtcAQ9D7H3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcAQ9D7H3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcAQ9D7H3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RtcAQ9D7H3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcAQ9D7H3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcAQ9D7H3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RtcAQ9D7H3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RtcAQ9D7H3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RtcAQ9D7H3 Gm22238-201ENSMUST00000175222 88 ntBASIC20.22■□□□□ 0.83
RtcAQ9D7H3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RtcAQ9D7H3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RtcAQ9D7H3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcAQ9D7H3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RtcAQ9D7H3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcAQ9D7H3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcAQ9D7H3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcAQ9D7H3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RtcAQ9D7H3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RtcAQ9D7H3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RtcAQ9D7H3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RtcAQ9D7H3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RtcAQ9D7H3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RtcAQ9D7H3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcAQ9D7H3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcAQ9D7H3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcAQ9D7H3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcAQ9D7H3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RtcAQ9D7H3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RtcAQ9D7H3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcAQ9D7H3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RtcAQ9D7H3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms