Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Snrnp48Q9D361 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.77■□□□□ 0.92
Snrnp48Q9D361 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Snrnp48Q9D361 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snrnp48Q9D361 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snrnp48Q9D361 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.76■□□□□ 0.91
Snrnp48Q9D361 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snrnp48Q9D361 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snrnp48Q9D361 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.75■□□□□ 0.91
Snrnp48Q9D361 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snrnp48Q9D361 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snrnp48Q9D361 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.75■□□□□ 0.91
Snrnp48Q9D361 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Snrnp48Q9D361 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snrnp48Q9D361 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.75■□□□□ 0.91
Snrnp48Q9D361 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snrnp48Q9D361 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snrnp48Q9D361 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snrnp48Q9D361 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Snrnp48Q9D361 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snrnp48Q9D361 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snrnp48Q9D361 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Snrnp48Q9D361 Gm15546-201ENSMUST00000122095 826 ntBASIC20.74■□□□□ 0.91
Snrnp48Q9D361 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.74■□□□□ 0.91
Snrnp48Q9D361 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Snrnp48Q9D361 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snrnp48Q9D361 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snrnp48Q9D361 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Snrnp48Q9D361 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
Snrnp48Q9D361 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snrnp48Q9D361 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Snrnp48Q9D361 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snrnp48Q9D361 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snrnp48Q9D361 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Snrnp48Q9D361 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snrnp48Q9D361 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snrnp48Q9D361 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.72■□□□□ 0.91
Snrnp48Q9D361 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snrnp48Q9D361 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snrnp48Q9D361 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snrnp48Q9D361 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snrnp48Q9D361 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Snrnp48Q9D361 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snrnp48Q9D361 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Snrnp48Q9D361 Gm15820-201ENSMUST00000201566 728 ntBASIC20.7■□□□□ 0.9
Snrnp48Q9D361 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.7■□□□□ 0.9
Snrnp48Q9D361 Gm40881-201ENSMUST00000223397 166 ntBASIC20.7■□□□□ 0.9
Snrnp48Q9D361 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snrnp48Q9D361 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.69■□□□□ 0.9
Snrnp48Q9D361 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Snrnp48Q9D361 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snrnp48Q9D361 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snrnp48Q9D361 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snrnp48Q9D361 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Snrnp48Q9D361 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snrnp48Q9D361 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snrnp48Q9D361 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snrnp48Q9D361 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snrnp48Q9D361 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Snrnp48Q9D361 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.68■□□□□ 0.9
Snrnp48Q9D361 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snrnp48Q9D361 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snrnp48Q9D361 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snrnp48Q9D361 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp48Q9D361 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp48Q9D361 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp48Q9D361 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Snrnp48Q9D361 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.66■□□□□ 0.9
Snrnp48Q9D361 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp48Q9D361 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp48Q9D361 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp48Q9D361 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.66■□□□□ 0.9
Snrnp48Q9D361 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snrnp48Q9D361 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp48Q9D361 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.65■□□□□ 0.9
Snrnp48Q9D361 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp48Q9D361 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms