Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1aQ9D132 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1aQ9D132 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.79■□□□□ 0.76
Upk1aQ9D132 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Upk1aQ9D132 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1aQ9D132 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Upk1aQ9D132 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1aQ9D132 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1aQ9D132 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Upk1aQ9D132 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1aQ9D132 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk1aQ9D132 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk1aQ9D132 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk1aQ9D132 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk1aQ9D132 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Upk1aQ9D132 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.78■□□□□ 0.76
Upk1aQ9D132 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.78■□□□□ 0.76
Upk1aQ9D132 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk1aQ9D132 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.78■□□□□ 0.76
Upk1aQ9D132 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upk1aQ9D132 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upk1aQ9D132 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.77■□□□□ 0.76
Upk1aQ9D132 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Upk1aQ9D132 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Upk1aQ9D132 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Upk1aQ9D132 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk1aQ9D132 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Upk1aQ9D132 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk1aQ9D132 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Upk1aQ9D132 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk1aQ9D132 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk1aQ9D132 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk1aQ9D132 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Upk1aQ9D132 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1aQ9D132 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1aQ9D132 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1aQ9D132 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1aQ9D132 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1aQ9D132 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1aQ9D132 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Upk1aQ9D132 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1aQ9D132 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1aQ9D132 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1aQ9D132 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Upk1aQ9D132 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1aQ9D132 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upk1aQ9D132 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Upk1aQ9D132 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Upk1aQ9D132 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.73■□□□□ 0.75
Upk1aQ9D132 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Upk1aQ9D132 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.73■□□□□ 0.75
Upk1aQ9D132 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upk1aQ9D132 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upk1aQ9D132 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upk1aQ9D132 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1aQ9D132 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1aQ9D132 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1aQ9D132 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1aQ9D132 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1aQ9D132 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Upk1aQ9D132 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1aQ9D132 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk1aQ9D132 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk1aQ9D132 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk1aQ9D132 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Upk1aQ9D132 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk1aQ9D132 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk1aQ9D132 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk1aQ9D132 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1aQ9D132 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1aQ9D132 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1aQ9D132 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1aQ9D132 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1aQ9D132 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1aQ9D132 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Upk1aQ9D132 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1aQ9D132 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.69■□□□□ 0.74
Upk1aQ9D132 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1aQ9D132 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1aQ9D132 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1aQ9D132 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1aQ9D132 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1aQ9D132 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Upk1aQ9D132 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upk1aQ9D132 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.67■□□□□ 0.74
Upk1aQ9D132 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upk1aQ9D132 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms