Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt2Q9CZN7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt2Q9CZN7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.78■□□□□ 0.76
Shmt2Q9CZN7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Shmt2Q9CZN7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt2Q9CZN7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt2Q9CZN7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt2Q9CZN7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt2Q9CZN7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Shmt2Q9CZN7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shmt2Q9CZN7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Shmt2Q9CZN7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shmt2Q9CZN7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Shmt2Q9CZN7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 Gm13238-201ENSMUST00000117655 780 ntBASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt2Q9CZN7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.75■□□□□ 0.75
Shmt2Q9CZN7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Shmt2Q9CZN7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shmt2Q9CZN7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shmt2Q9CZN7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Shmt2Q9CZN7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt2Q9CZN7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Shmt2Q9CZN7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt2Q9CZN7 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.74■□□□□ 0.75
Shmt2Q9CZN7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Shmt2Q9CZN7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt2Q9CZN7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt2Q9CZN7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt2Q9CZN7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt2Q9CZN7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt2Q9CZN7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt2Q9CZN7 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.73■□□□□ 0.75
Shmt2Q9CZN7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Shmt2Q9CZN7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.73■□□□□ 0.75
Shmt2Q9CZN7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt2Q9CZN7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt2Q9CZN7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt2Q9CZN7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.73■□□□□ 0.75
Shmt2Q9CZN7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Shmt2Q9CZN7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shmt2Q9CZN7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shmt2Q9CZN7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Shmt2Q9CZN7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shmt2Q9CZN7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.72■□□□□ 0.75
Shmt2Q9CZN7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shmt2Q9CZN7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shmt2Q9CZN7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shmt2Q9CZN7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.71■□□□□ 0.75
Shmt2Q9CZN7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shmt2Q9CZN7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Shmt2Q9CZN7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Gm5812-201ENSMUST00000061073 957 ntBASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shmt2Q9CZN7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shmt2Q9CZN7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Shmt2Q9CZN7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shmt2Q9CZN7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shmt2Q9CZN7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shmt2Q9CZN7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Shmt2Q9CZN7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shmt2Q9CZN7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.68■□□□□ 0.74
Shmt2Q9CZN7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.68■□□□□ 0.74
Shmt2Q9CZN7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shmt2Q9CZN7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Shmt2Q9CZN7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shmt2Q9CZN7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shmt2Q9CZN7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.68■□□□□ 0.74
Shmt2Q9CZN7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shmt2Q9CZN7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shmt2Q9CZN7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms