Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ssu72Q9CY97 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ssu72Q9CY97 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ssu72Q9CY97 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssu72Q9CY97 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssu72Q9CY97 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssu72Q9CY97 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ssu72Q9CY97 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.73■□□□□ 0.91
Ssu72Q9CY97 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ssu72Q9CY97 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.73■□□□□ 0.91
Ssu72Q9CY97 Gm9806-201ENSMUST00000051080 552 ntBASIC20.73■□□□□ 0.91
Ssu72Q9CY97 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssu72Q9CY97 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssu72Q9CY97 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ssu72Q9CY97 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ssu72Q9CY97 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssu72Q9CY97 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.72■□□□□ 0.91
Ssu72Q9CY97 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ssu72Q9CY97 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ssu72Q9CY97 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ssu72Q9CY97 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ssu72Q9CY97 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ssu72Q9CY97 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ssu72Q9CY97 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ssu72Q9CY97 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ssu72Q9CY97 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ssu72Q9CY97 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ssu72Q9CY97 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssu72Q9CY97 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Scarna2-201ENSMUST00000157560 414 ntBASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ssu72Q9CY97 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssu72Q9CY97 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssu72Q9CY97 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssu72Q9CY97 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ssu72Q9CY97 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssu72Q9CY97 Gm16437-201ENSMUST00000025669 507 ntBASIC20.68■□□□□ 0.9
Ssu72Q9CY97 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ssu72Q9CY97 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssu72Q9CY97 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssu72Q9CY97 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ssu72Q9CY97 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssu72Q9CY97 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.67■□□□□ 0.9
Ssu72Q9CY97 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.67■□□□□ 0.9
Ssu72Q9CY97 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssu72Q9CY97 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssu72Q9CY97 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssu72Q9CY97 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssu72Q9CY97 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssu72Q9CY97 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.66■□□□□ 0.9
Ssu72Q9CY97 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ssu72Q9CY97 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssu72Q9CY97 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ssu72Q9CY97 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ssu72Q9CY97 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssu72Q9CY97 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.66■□□□□ 0.9
Ssu72Q9CY97 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.66■□□□□ 0.9
Ssu72Q9CY97 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.66■□□□□ 0.9
Ssu72Q9CY97 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssu72Q9CY97 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssu72Q9CY97 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssu72Q9CY97 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssu72Q9CY97 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssu72Q9CY97 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssu72Q9CY97 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ssu72Q9CY97 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssu72Q9CY97 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ssu72Q9CY97 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssu72Q9CY97 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssu72Q9CY97 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ssu72Q9CY97 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ssu72Q9CY97 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.64■□□□□ 0.89
Ssu72Q9CY97 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssu72Q9CY97 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ssu72Q9CY97 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssu72Q9CY97 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ssu72Q9CY97 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssu72Q9CY97 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssu72Q9CY97 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssu72Q9CY97 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ssu72Q9CY97 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ssu72Q9CY97 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssu72Q9CY97 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ssu72Q9CY97 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssu72Q9CY97 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ssu72Q9CY97 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Ssu72Q9CY97 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms