Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Fcf1Q9CTH6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fcf1Q9CTH6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fcf1Q9CTH6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fcf1Q9CTH6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fcf1Q9CTH6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fcf1Q9CTH6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fcf1Q9CTH6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fcf1Q9CTH6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Fcf1Q9CTH6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Fcf1Q9CTH6 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.97■□□□□ 0.95
Fcf1Q9CTH6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fcf1Q9CTH6 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.97■□□□□ 0.95
Fcf1Q9CTH6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fcf1Q9CTH6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fcf1Q9CTH6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fcf1Q9CTH6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fcf1Q9CTH6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Fcf1Q9CTH6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fcf1Q9CTH6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Fcf1Q9CTH6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.95■□□□□ 0.94
Fcf1Q9CTH6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.95■□□□□ 0.94
Fcf1Q9CTH6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.95■□□□□ 0.94
Fcf1Q9CTH6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Fcf1Q9CTH6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fcf1Q9CTH6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fcf1Q9CTH6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fcf1Q9CTH6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Fcf1Q9CTH6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Fcf1Q9CTH6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fcf1Q9CTH6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fcf1Q9CTH6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fcf1Q9CTH6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.93■□□□□ 0.94
Fcf1Q9CTH6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.93■□□□□ 0.94
Fcf1Q9CTH6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fcf1Q9CTH6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fcf1Q9CTH6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fcf1Q9CTH6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Fcf1Q9CTH6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fcf1Q9CTH6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fcf1Q9CTH6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.92■□□□□ 0.94
Fcf1Q9CTH6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Fcf1Q9CTH6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fcf1Q9CTH6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Fcf1Q9CTH6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fcf1Q9CTH6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fcf1Q9CTH6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
Fcf1Q9CTH6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fcf1Q9CTH6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Fcf1Q9CTH6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.91■□□□□ 0.94
Fcf1Q9CTH6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fcf1Q9CTH6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Fcf1Q9CTH6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fcf1Q9CTH6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fcf1Q9CTH6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Fcf1Q9CTH6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fcf1Q9CTH6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Fcf1Q9CTH6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Fcf1Q9CTH6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Fcf1Q9CTH6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Fcf1Q9CTH6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Fcf1Q9CTH6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Fcf1Q9CTH6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Fcf1Q9CTH6 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.89■□□□□ 0.93
Fcf1Q9CTH6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fcf1Q9CTH6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Fcf1Q9CTH6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.88■□□□□ 0.93
Fcf1Q9CTH6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.88■□□□□ 0.93
Fcf1Q9CTH6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.88■□□□□ 0.93
Fcf1Q9CTH6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Fcf1Q9CTH6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Fcf1Q9CTH6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Fcf1Q9CTH6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Fcf1Q9CTH6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fcf1Q9CTH6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Fcf1Q9CTH6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Fcf1Q9CTH6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fcf1Q9CTH6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fcf1Q9CTH6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Fcf1Q9CTH6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Fcf1Q9CTH6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Fcf1Q9CTH6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Fcf1Q9CTH6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Fcf1Q9CTH6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fcf1Q9CTH6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.85■□□□□ 0.93
Fcf1Q9CTH6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Fcf1Q9CTH6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Fcf1Q9CTH6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fcf1Q9CTH6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fcf1Q9CTH6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Fcf1Q9CTH6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fcf1Q9CTH6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.84■□□□□ 0.93
Fcf1Q9CTH6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fcf1Q9CTH6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fcf1Q9CTH6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
Fcf1Q9CTH6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Fcf1Q9CTH6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fcf1Q9CTH6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Fcf1Q9CTH6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
Fcf1Q9CTH6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms