Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg3Q9CQV4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retreg3Q9CQV4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retreg3Q9CQV4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.94■□□□□ 0.94
Retreg3Q9CQV4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retreg3Q9CQV4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retreg3Q9CQV4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retreg3Q9CQV4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retreg3Q9CQV4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retreg3Q9CQV4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Retreg3Q9CQV4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.93■□□□□ 0.94
Retreg3Q9CQV4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Retreg3Q9CQV4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.93■□□□□ 0.94
Retreg3Q9CQV4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Retreg3Q9CQV4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Gm10399-202ENSMUST00000202768 748 ntBASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Retreg3Q9CQV4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg3Q9CQV4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg3Q9CQV4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.91■□□□□ 0.94
Retreg3Q9CQV4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.91■□□□□ 0.94
Retreg3Q9CQV4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.91■□□□□ 0.94
Retreg3Q9CQV4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg3Q9CQV4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg3Q9CQV4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg3Q9CQV4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg3Q9CQV4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg3Q9CQV4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg3Q9CQV4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg3Q9CQV4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg3Q9CQV4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg3Q9CQV4 Etf1-202ENSMUST00000180351 108 ntBASIC20.9■□□□□ 0.94
Retreg3Q9CQV4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg3Q9CQV4 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.9■□□□□ 0.94
Retreg3Q9CQV4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg3Q9CQV4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg3Q9CQV4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg3Q9CQV4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg3Q9CQV4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.89■□□□□ 0.94
Retreg3Q9CQV4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Retreg3Q9CQV4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.89■□□□□ 0.93
Retreg3Q9CQV4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.89■□□□□ 0.93
Retreg3Q9CQV4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.89■□□□□ 0.93
Retreg3Q9CQV4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retreg3Q9CQV4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retreg3Q9CQV4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retreg3Q9CQV4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Retreg3Q9CQV4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retreg3Q9CQV4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retreg3Q9CQV4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg3Q9CQV4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg3Q9CQV4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg3Q9CQV4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg3Q9CQV4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg3Q9CQV4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.88■□□□□ 0.93
Retreg3Q9CQV4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg3Q9CQV4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg3Q9CQV4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg3Q9CQV4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retreg3Q9CQV4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retreg3Q9CQV4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Retreg3Q9CQV4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retreg3Q9CQV4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retreg3Q9CQV4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg3Q9CQV4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg3Q9CQV4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg3Q9CQV4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg3Q9CQV4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg3Q9CQV4 Gm40881-201ENSMUST00000223397 166 ntBASIC20.86■□□□□ 0.93
Retreg3Q9CQV4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg3Q9CQV4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg3Q9CQV4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retreg3Q9CQV4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.85■□□□□ 0.93
Retreg3Q9CQV4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.85■□□□□ 0.93
Retreg3Q9CQV4 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.85■□□□□ 0.93
Retreg3Q9CQV4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retreg3Q9CQV4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retreg3Q9CQV4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retreg3Q9CQV4 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC20.84■□□□□ 0.93
Retreg3Q9CQV4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retreg3Q9CQV4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retreg3Q9CQV4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Retreg3Q9CQV4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retreg3Q9CQV4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
Retreg3Q9CQV4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retreg3Q9CQV4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retreg3Q9CQV4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.83■□□□□ 0.93
Retreg3Q9CQV4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retreg3Q9CQV4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
Retreg3Q9CQV4 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms