Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TpbpbQ9CQC0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TpbpbQ9CQC0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TpbpbQ9CQC0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TpbpbQ9CQC0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.47■□□□□ 0.55
TpbpbQ9CQC0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.47■□□□□ 0.55
TpbpbQ9CQC0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.47■□□□□ 0.55
TpbpbQ9CQC0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TpbpbQ9CQC0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TpbpbQ9CQC0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TpbpbQ9CQC0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TpbpbQ9CQC0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
TpbpbQ9CQC0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
TpbpbQ9CQC0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TpbpbQ9CQC0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TpbpbQ9CQC0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TpbpbQ9CQC0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.46■□□□□ 0.55
TpbpbQ9CQC0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.46■□□□□ 0.55
TpbpbQ9CQC0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TpbpbQ9CQC0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TpbpbQ9CQC0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TpbpbQ9CQC0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TpbpbQ9CQC0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TpbpbQ9CQC0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TpbpbQ9CQC0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TpbpbQ9CQC0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TpbpbQ9CQC0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TpbpbQ9CQC0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TpbpbQ9CQC0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TpbpbQ9CQC0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TpbpbQ9CQC0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TpbpbQ9CQC0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TpbpbQ9CQC0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TpbpbQ9CQC0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TpbpbQ9CQC0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TpbpbQ9CQC0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TpbpbQ9CQC0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TpbpbQ9CQC0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 Gm6311-201ENSMUST00000073790 878 ntBASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TpbpbQ9CQC0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TpbpbQ9CQC0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.4■□□□□ 0.54
TpbpbQ9CQC0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TpbpbQ9CQC0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.4■□□□□ 0.54
TpbpbQ9CQC0 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.4■□□□□ 0.54
TpbpbQ9CQC0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TpbpbQ9CQC0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TpbpbQ9CQC0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
TpbpbQ9CQC0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TpbpbQ9CQC0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TpbpbQ9CQC0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TpbpbQ9CQC0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TpbpbQ9CQC0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TpbpbQ9CQC0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms