Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim34aQ99PP6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Trim34aQ99PP6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.83■■□□□ 1.73
Trim34aQ99PP6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Trim34aQ99PP6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.83■■□□□ 1.72
Trim34aQ99PP6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Trim34aQ99PP6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC25.82■■□□□ 1.72
Trim34aQ99PP6 Gm8770-201ENSMUST00000121113 1109 ntBASIC25.82■■□□□ 1.72
Trim34aQ99PP6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Trim34aQ99PP6 Gm2011-201ENSMUST00000203124 1263 ntBASIC25.82■■□□□ 1.72
Trim34aQ99PP6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim34aQ99PP6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Trim34aQ99PP6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Trim34aQ99PP6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
Trim34aQ99PP6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Trim34aQ99PP6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
Trim34aQ99PP6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Trim34aQ99PP6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
Trim34aQ99PP6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Trim34aQ99PP6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Trim34aQ99PP6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Trim34aQ99PP6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim34aQ99PP6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Trim34aQ99PP6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC25.8■■□□□ 1.72
Trim34aQ99PP6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Trim34aQ99PP6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim34aQ99PP6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim34aQ99PP6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim34aQ99PP6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim34aQ99PP6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim34aQ99PP6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim34aQ99PP6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim34aQ99PP6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC25.79■■□□□ 1.72
Trim34aQ99PP6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim34aQ99PP6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Trim34aQ99PP6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
Trim34aQ99PP6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim34aQ99PP6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Trim34aQ99PP6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
Trim34aQ99PP6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Trim34aQ99PP6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trim34aQ99PP6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
Trim34aQ99PP6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC25.78■■□□□ 1.72
Trim34aQ99PP6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC25.78■■□□□ 1.72
Trim34aQ99PP6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trim34aQ99PP6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC25.78■■□□□ 1.72
Trim34aQ99PP6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
Trim34aQ99PP6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim34aQ99PP6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim34aQ99PP6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim34aQ99PP6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Trim34aQ99PP6 Gm43759-201ENSMUST00000196925 1261 ntBASIC25.77■■□□□ 1.72
Trim34aQ99PP6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC25.77■■□□□ 1.72
Trim34aQ99PP6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim34aQ99PP6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim34aQ99PP6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim34aQ99PP6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim34aQ99PP6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim34aQ99PP6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Gm8495-201ENSMUST00000188740 694 ntBASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim34aQ99PP6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Trim34aQ99PP6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Trim34aQ99PP6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Trim34aQ99PP6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC25.75■■□□□ 1.71
Trim34aQ99PP6 Gm43017-201ENSMUST00000198296 752 ntBASIC25.75■■□□□ 1.71
Trim34aQ99PP6 Gm21168-201ENSMUST00000199646 1096 ntBASIC25.75■■□□□ 1.71
Trim34aQ99PP6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Trim34aQ99PP6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Trim34aQ99PP6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
Trim34aQ99PP6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trim34aQ99PP6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC25.74■■□□□ 1.71
Trim34aQ99PP6 Gm18284-201ENSMUST00000172604 624 ntBASIC25.74■■□□□ 1.71
Trim34aQ99PP6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Trim34aQ99PP6 Gm8493-201ENSMUST00000196881 489 ntBASIC25.74■■□□□ 1.71
Trim34aQ99PP6 Gm5576-201ENSMUST00000075809 1236 ntBASIC25.74■■□□□ 1.71
Trim34aQ99PP6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
Trim34aQ99PP6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trim34aQ99PP6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Trim34aQ99PP6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Trim34aQ99PP6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Trim34aQ99PP6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC25.73■■□□□ 1.71
Trim34aQ99PP6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Trim34aQ99PP6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC25.72■■□□□ 1.71
Trim34aQ99PP6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Trim34aQ99PP6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
Trim34aQ99PP6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC25.72■■□□□ 1.71
Trim34aQ99PP6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Trim34aQ99PP6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Trim34aQ99PP6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trim34aQ99PP6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms