Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col25a1Q99MQ5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Col25a1Q99MQ5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col25a1Q99MQ5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col25a1Q99MQ5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Col25a1Q99MQ5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.7■■□□□ 1.07
Col25a1Q99MQ5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col25a1Q99MQ5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col25a1Q99MQ5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.7■■□□□ 1.06
Col25a1Q99MQ5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col25a1Q99MQ5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Col25a1Q99MQ5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.7■■□□□ 1.06
Col25a1Q99MQ5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col25a1Q99MQ5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col25a1Q99MQ5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col25a1Q99MQ5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col25a1Q99MQ5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.69■■□□□ 1.06
Col25a1Q99MQ5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Col25a1Q99MQ5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col25a1Q99MQ5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col25a1Q99MQ5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.68■■□□□ 1.06
Col25a1Q99MQ5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col25a1Q99MQ5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col25a1Q99MQ5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col25a1Q99MQ5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Col25a1Q99MQ5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col25a1Q99MQ5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col25a1Q99MQ5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col25a1Q99MQ5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.67■■□□□ 1.06
Col25a1Q99MQ5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col25a1Q99MQ5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Col25a1Q99MQ5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Col25a1Q99MQ5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Col25a1Q99MQ5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col25a1Q99MQ5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Col25a1Q99MQ5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col25a1Q99MQ5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col25a1Q99MQ5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.65■■□□□ 1.06
Col25a1Q99MQ5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.65■■□□□ 1.06
Col25a1Q99MQ5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col25a1Q99MQ5 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.64■■□□□ 1.06
Col25a1Q99MQ5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Col25a1Q99MQ5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Col25a1Q99MQ5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Col25a1Q99MQ5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.64■■□□□ 1.05
Col25a1Q99MQ5 Gm10033-202ENSMUST00000211874 928 ntBASIC21.64■■□□□ 1.05
Col25a1Q99MQ5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.63■■□□□ 1.05
Col25a1Q99MQ5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col25a1Q99MQ5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col25a1Q99MQ5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Col25a1Q99MQ5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col25a1Q99MQ5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.63■■□□□ 1.05
Col25a1Q99MQ5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Col25a1Q99MQ5 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.63■■□□□ 1.05
Col25a1Q99MQ5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col25a1Q99MQ5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col25a1Q99MQ5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col25a1Q99MQ5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Col25a1Q99MQ5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col25a1Q99MQ5 Gm12933-201ENSMUST00000120203 872 ntBASIC21.62■■□□□ 1.05
Col25a1Q99MQ5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.62■■□□□ 1.05
Col25a1Q99MQ5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col25a1Q99MQ5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col25a1Q99MQ5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col25a1Q99MQ5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col25a1Q99MQ5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col25a1Q99MQ5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col25a1Q99MQ5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.61■■□□□ 1.05
Col25a1Q99MQ5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Col25a1Q99MQ5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.61■■□□□ 1.05
Col25a1Q99MQ5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.61■■□□□ 1.05
Col25a1Q99MQ5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col25a1Q99MQ5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.61■■□□□ 1.05
Col25a1Q99MQ5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col25a1Q99MQ5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col25a1Q99MQ5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Col25a1Q99MQ5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col25a1Q99MQ5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col25a1Q99MQ5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Col25a1Q99MQ5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col25a1Q99MQ5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col25a1Q99MQ5 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.59■■□□□ 1.05
Col25a1Q99MQ5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col25a1Q99MQ5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col25a1Q99MQ5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col25a1Q99MQ5 Gm12251-201ENSMUST00000117893 792 ntBASIC21.58■■□□□ 1.05
Col25a1Q99MQ5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col25a1Q99MQ5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Col25a1Q99MQ5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col25a1Q99MQ5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Col25a1Q99MQ5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col25a1Q99MQ5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
Col25a1Q99MQ5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col25a1Q99MQ5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Col25a1Q99MQ5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Col25a1Q99MQ5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.57■■□□□ 1.04
Col25a1Q99MQ5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col25a1Q99MQ5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col25a1Q99MQ5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col25a1Q99MQ5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms