Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clcc1Q99LI2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
Clcc1Q99LI2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcc1Q99LI2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcc1Q99LI2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcc1Q99LI2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcc1Q99LI2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcc1Q99LI2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcc1Q99LI2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcc1Q99LI2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.56■□□□□ 0.88
Clcc1Q99LI2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Clcc1Q99LI2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clcc1Q99LI2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Clcc1Q99LI2 Gm12922-201ENSMUST00000120626 809 ntBASIC20.56■□□□□ 0.88
Clcc1Q99LI2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcc1Q99LI2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcc1Q99LI2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcc1Q99LI2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcc1Q99LI2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcc1Q99LI2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Clcc1Q99LI2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcc1Q99LI2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcc1Q99LI2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Clcc1Q99LI2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcc1Q99LI2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcc1Q99LI2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.53■□□□□ 0.88
Clcc1Q99LI2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Clcc1Q99LI2 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.53■□□□□ 0.88
Clcc1Q99LI2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Clcc1Q99LI2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcc1Q99LI2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Clcc1Q99LI2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
Clcc1Q99LI2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcc1Q99LI2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.5■□□□□ 0.87
Clcc1Q99LI2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.5■□□□□ 0.87
Clcc1Q99LI2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcc1Q99LI2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcc1Q99LI2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcc1Q99LI2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Clcc1Q99LI2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcc1Q99LI2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcc1Q99LI2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Clcc1Q99LI2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcc1Q99LI2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Clcc1Q99LI2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcc1Q99LI2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clcc1Q99LI2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.48■□□□□ 0.87
Clcc1Q99LI2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clcc1Q99LI2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.48■□□□□ 0.87
Clcc1Q99LI2 Golgb1-201ENSMUST00000023534 498 ntBASIC20.48■□□□□ 0.87
Clcc1Q99LI2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcc1Q99LI2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Clcc1Q99LI2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Clcc1Q99LI2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcc1Q99LI2 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.47■□□□□ 0.87
Clcc1Q99LI2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.47■□□□□ 0.87
Clcc1Q99LI2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.47■□□□□ 0.87
Clcc1Q99LI2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Clcc1Q99LI2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.47■□□□□ 0.87
Clcc1Q99LI2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Clcc1Q99LI2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcc1Q99LI2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Clcc1Q99LI2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcc1Q99LI2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcc1Q99LI2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms