Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp1aQ921W0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.24■□□□□ 0.51
Chmp1aQ921W0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Chmp1aQ921W0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp1aQ921W0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.24■□□□□ 0.51
Chmp1aQ921W0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp1aQ921W0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Chmp1aQ921W0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chmp1aQ921W0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp1aQ921W0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp1aQ921W0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.22■□□□□ 0.51
Chmp1aQ921W0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp1aQ921W0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.22■□□□□ 0.51
Chmp1aQ921W0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp1aQ921W0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Chmp1aQ921W0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.22■□□□□ 0.51
Chmp1aQ921W0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.22■□□□□ 0.51
Chmp1aQ921W0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp1aQ921W0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp1aQ921W0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp1aQ921W0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp1aQ921W0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp1aQ921W0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp1aQ921W0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp1aQ921W0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp1aQ921W0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp1aQ921W0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp1aQ921W0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.21■□□□□ 0.51
Chmp1aQ921W0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp1aQ921W0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp1aQ921W0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp1aQ921W0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp1aQ921W0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp1aQ921W0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp1aQ921W0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp1aQ921W0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Chmp1aQ921W0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp1aQ921W0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Chmp1aQ921W0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp1aQ921W0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Chmp1aQ921W0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp1aQ921W0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp1aQ921W0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp1aQ921W0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp1aQ921W0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.18■□□□□ 0.5
Chmp1aQ921W0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp1aQ921W0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp1aQ921W0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp1aQ921W0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Chmp1aQ921W0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp1aQ921W0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp1aQ921W0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp1aQ921W0 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.17■□□□□ 0.5
Chmp1aQ921W0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Chmp1aQ921W0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp1aQ921W0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp1aQ921W0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp1aQ921W0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp1aQ921W0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp1aQ921W0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp1aQ921W0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp1aQ921W0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp1aQ921W0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp1aQ921W0 Gm6311-201ENSMUST00000073790 878 ntBASIC18.16■□□□□ 0.5
Chmp1aQ921W0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp1aQ921W0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp1aQ921W0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp1aQ921W0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chmp1aQ921W0 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.15■□□□□ 0.5
Chmp1aQ921W0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp1aQ921W0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp1aQ921W0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp1aQ921W0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.15■□□□□ 0.5
Chmp1aQ921W0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.15■□□□□ 0.5
Chmp1aQ921W0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Chmp1aQ921W0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp1aQ921W0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chmp1aQ921W0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chmp1aQ921W0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.14■□□□□ 0.49
Chmp1aQ921W0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp1aQ921W0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp1aQ921W0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp1aQ921W0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp1aQ921W0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms