Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb2Q91XX7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb2Q91XX7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb2Q91XX7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb2Q91XX7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb2Q91XX7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb2Q91XX7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.47■□□□□ 0.71
Pcdhgb2Q91XX7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb2Q91XX7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Pcdhgb2Q91XX7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb2Q91XX7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb2Q91XX7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgb2Q91XX7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhgb2Q91XX7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb2Q91XX7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhgb2Q91XX7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb2Q91XX7 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.46■□□□□ 0.71
Pcdhgb2Q91XX7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb2Q91XX7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb2Q91XX7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhgb2Q91XX7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhgb2Q91XX7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhgb2Q91XX7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb2Q91XX7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb2Q91XX7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb2Q91XX7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb2Q91XX7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhgb2Q91XX7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb2Q91XX7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb2Q91XX7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb2Q91XX7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb2Q91XX7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb2Q91XX7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb2Q91XX7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb2Q91XX7 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.44■□□□□ 0.7
Pcdhgb2Q91XX7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdhgb2Q91XX7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb2Q91XX7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb2Q91XX7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb2Q91XX7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb2Q91XX7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb2Q91XX7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb2Q91XX7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb2Q91XX7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhgb2Q91XX7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.43■□□□□ 0.7
Pcdhgb2Q91XX7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb2Q91XX7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb2Q91XX7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb2Q91XX7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhgb2Q91XX7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb2Q91XX7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb2Q91XX7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb2Q91XX7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb2Q91XX7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb2Q91XX7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdhgb2Q91XX7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.42■□□□□ 0.7
Pcdhgb2Q91XX7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhgb2Q91XX7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Pcdhgb2Q91XX7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb2Q91XX7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb2Q91XX7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb2Q91XX7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb2Q91XX7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb2Q91XX7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb2Q91XX7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb2Q91XX7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb2Q91XX7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb2Q91XX7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb2Q91XX7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb2Q91XX7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhgb2Q91XX7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb2Q91XX7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb2Q91XX7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb2Q91XX7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb2Q91XX7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb2Q91XX7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb2Q91XX7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb2Q91XX7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb2Q91XX7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb2Q91XX7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb2Q91XX7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb2Q91XX7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb2Q91XX7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb2Q91XX7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb2Q91XX7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb2Q91XX7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb2Q91XX7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb2Q91XX7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhgb2Q91XX7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms