Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdhgc3Q91XX1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhgc3Q91XX1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgc3Q91XX1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc3Q91XX1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhgc3Q91XX1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhgc3Q91XX1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.55■□□□□ 0.72
Pcdhgc3Q91XX1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc3Q91XX1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgc3Q91XX1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc3Q91XX1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc3Q91XX1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc3Q91XX1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc3Q91XX1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc3Q91XX1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc3Q91XX1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc3Q91XX1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc3Q91XX1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc3Q91XX1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc3Q91XX1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgc3Q91XX1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc3Q91XX1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc3Q91XX1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.53■□□□□ 0.72
Pcdhgc3Q91XX1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Pcdhgc3Q91XX1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc3Q91XX1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc3Q91XX1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc3Q91XX1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhgc3Q91XX1 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.53■□□□□ 0.72
Pcdhgc3Q91XX1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgc3Q91XX1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhgc3Q91XX1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgc3Q91XX1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgc3Q91XX1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgc3Q91XX1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdhgc3Q91XX1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhgc3Q91XX1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhgc3Q91XX1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhgc3Q91XX1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhgc3Q91XX1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc3Q91XX1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc3Q91XX1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc3Q91XX1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc3Q91XX1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc3Q91XX1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdhgc3Q91XX1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc3Q91XX1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc3Q91XX1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc3Q91XX1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhgc3Q91XX1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc3Q91XX1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.5■□□□□ 0.71
Pcdhgc3Q91XX1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Pcdhgc3Q91XX1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc3Q91XX1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc3Q91XX1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc3Q91XX1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc3Q91XX1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc3Q91XX1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc3Q91XX1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc3Q91XX1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhgc3Q91XX1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc3Q91XX1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc3Q91XX1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhgc3Q91XX1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc3Q91XX1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc3Q91XX1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhgc3Q91XX1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms