Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab40bQ8VHP8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab40bQ8VHP8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.7■□□□□ 0.58
Rab40bQ8VHP8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab40bQ8VHP8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab40bQ8VHP8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab40bQ8VHP8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab40bQ8VHP8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rab40bQ8VHP8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40bQ8VHP8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab40bQ8VHP8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab40bQ8VHP8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.68■□□□□ 0.58
Rab40bQ8VHP8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab40bQ8VHP8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab40bQ8VHP8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab40bQ8VHP8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab40bQ8VHP8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab40bQ8VHP8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.68■□□□□ 0.58
Rab40bQ8VHP8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab40bQ8VHP8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab40bQ8VHP8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab40bQ8VHP8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab40bQ8VHP8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.67■□□□□ 0.58
Rab40bQ8VHP8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Rab40bQ8VHP8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.67■□□□□ 0.58
Rab40bQ8VHP8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rab40bQ8VHP8 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.67■□□□□ 0.58
Rab40bQ8VHP8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rab40bQ8VHP8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rab40bQ8VHP8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40bQ8VHP8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rab40bQ8VHP8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab40bQ8VHP8 Gm9806-201ENSMUST00000051080 552 ntBASIC18.65■□□□□ 0.58
Rab40bQ8VHP8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab40bQ8VHP8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rab40bQ8VHP8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rab40bQ8VHP8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rab40bQ8VHP8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rab40bQ8VHP8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab40bQ8VHP8 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.64■□□□□ 0.57
Rab40bQ8VHP8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab40bQ8VHP8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rab40bQ8VHP8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.64■□□□□ 0.57
Rab40bQ8VHP8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab40bQ8VHP8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab40bQ8VHP8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab40bQ8VHP8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab40bQ8VHP8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab40bQ8VHP8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab40bQ8VHP8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab40bQ8VHP8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab40bQ8VHP8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab40bQ8VHP8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab40bQ8VHP8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rab40bQ8VHP8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab40bQ8VHP8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab40bQ8VHP8 Scarna2-201ENSMUST00000157560 414 ntBASIC18.62■□□□□ 0.57
Rab40bQ8VHP8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab40bQ8VHP8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab40bQ8VHP8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab40bQ8VHP8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rab40bQ8VHP8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.62■□□□□ 0.57
Rab40bQ8VHP8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab40bQ8VHP8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab40bQ8VHP8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Rab40bQ8VHP8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab40bQ8VHP8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab40bQ8VHP8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rab40bQ8VHP8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab40bQ8VHP8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab40bQ8VHP8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.61■□□□□ 0.57
Rab40bQ8VHP8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab40bQ8VHP8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.61■□□□□ 0.57
Rab40bQ8VHP8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rab40bQ8VHP8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rab40bQ8VHP8 Gm16437-201ENSMUST00000025669 507 ntBASIC18.61■□□□□ 0.57
Rab40bQ8VHP8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms