Protein–RNA interactions for Protein: Q8VE09

Ttc39c, Tetratricopeptide repeat protein 39C, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39cQ8VE09 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ttc39cQ8VE09 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ttc39cQ8VE09 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ttc39cQ8VE09 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ttc39cQ8VE09 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.38■■□□□ 1.01
Ttc39cQ8VE09 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.38■■□□□ 1.01
Ttc39cQ8VE09 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ttc39cQ8VE09 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ttc39cQ8VE09 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ttc39cQ8VE09 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ttc39cQ8VE09 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ttc39cQ8VE09 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ttc39cQ8VE09 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.37■■□□□ 1.01
Ttc39cQ8VE09 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ttc39cQ8VE09 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Ttc39cQ8VE09 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc39cQ8VE09 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc39cQ8VE09 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc39cQ8VE09 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc39cQ8VE09 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc39cQ8VE09 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ttc39cQ8VE09 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc39cQ8VE09 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ttc39cQ8VE09 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ttc39cQ8VE09 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc39cQ8VE09 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
Ttc39cQ8VE09 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc39cQ8VE09 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc39cQ8VE09 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc39cQ8VE09 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ttc39cQ8VE09 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ttc39cQ8VE09 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ttc39cQ8VE09 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ttc39cQ8VE09 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ttc39cQ8VE09 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Ttc39cQ8VE09 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.33■■□□□ 1.01
Ttc39cQ8VE09 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ttc39cQ8VE09 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ttc39cQ8VE09 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ttc39cQ8VE09 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ttc39cQ8VE09 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ttc39cQ8VE09 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ttc39cQ8VE09 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ttc39cQ8VE09 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.32■■□□□ 1
Ttc39cQ8VE09 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ttc39cQ8VE09 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc39cQ8VE09 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc39cQ8VE09 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ttc39cQ8VE09 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc39cQ8VE09 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc39cQ8VE09 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ttc39cQ8VE09 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc39cQ8VE09 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Ttc39cQ8VE09 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc39cQ8VE09 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ttc39cQ8VE09 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc39cQ8VE09 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc39cQ8VE09 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc39cQ8VE09 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.31■■□□□ 1
Ttc39cQ8VE09 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc39cQ8VE09 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc39cQ8VE09 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.31■■□□□ 1
Ttc39cQ8VE09 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ttc39cQ8VE09 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ttc39cQ8VE09 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Ttc39cQ8VE09 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ttc39cQ8VE09 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ttc39cQ8VE09 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Ttc39cQ8VE09 Gm9847-201ENSMUST00000052528 599 ntBASIC21.3■■□□□ 1
Ttc39cQ8VE09 Gm13241-201ENSMUST00000094493 780 ntBASIC21.3■■□□□ 1
Ttc39cQ8VE09 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ttc39cQ8VE09 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ttc39cQ8VE09 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc39cQ8VE09 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc39cQ8VE09 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc39cQ8VE09 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ttc39cQ8VE09 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.29■■□□□ 1
Ttc39cQ8VE09 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.28■■□□□ 1
Ttc39cQ8VE09 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ttc39cQ8VE09 Gm12922-201ENSMUST00000120626 809 ntBASIC21.28■■□□□ 1
Ttc39cQ8VE09 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ttc39cQ8VE09 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ttc39cQ8VE09 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ttc39cQ8VE09 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ttc39cQ8VE09 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc39cQ8VE09 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc39cQ8VE09 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ttc39cQ8VE09 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ttc39cQ8VE09 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc39cQ8VE09 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.27■■□□□ 1
Ttc39cQ8VE09 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.27■■□□□ 1
Ttc39cQ8VE09 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ttc39cQ8VE09 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.27■■□□□ 1
Ttc39cQ8VE09 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.27■■□□□ 1
Ttc39cQ8VE09 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc39cQ8VE09 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ttc39cQ8VE09 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc39cQ8VE09 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ttc39cQ8VE09 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.26■□□□□ 0.99
Ttc39cQ8VE09 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms