Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Sh3kbp1Q8R550 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3kbp1Q8R550 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3kbp1Q8R550 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3kbp1Q8R550 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sh3kbp1Q8R550 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3kbp1Q8R550 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3kbp1Q8R550 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3kbp1Q8R550 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sh3kbp1Q8R550 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3kbp1Q8R550 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3kbp1Q8R550 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3kbp1Q8R550 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.38■■□□□ 1.01
Sh3kbp1Q8R550 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3kbp1Q8R550 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3kbp1Q8R550 Gm13241-201ENSMUST00000094493 780 ntBASIC21.38■■□□□ 1.01
Sh3kbp1Q8R550 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3kbp1Q8R550 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3kbp1Q8R550 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3kbp1Q8R550 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sh3kbp1Q8R550 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3kbp1Q8R550 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3kbp1Q8R550 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3kbp1Q8R550 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.37■■□□□ 1.01
Sh3kbp1Q8R550 Gm10399-202ENSMUST00000202768 748 ntBASIC21.37■■□□□ 1.01
Sh3kbp1Q8R550 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3kbp1Q8R550 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sh3kbp1Q8R550 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Sh3kbp1Q8R550 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3kbp1Q8R550 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.36■■□□□ 1.01
Sh3kbp1Q8R550 Gm21956-201ENSMUST00000179946 522 ntBASIC21.36■■□□□ 1.01
Sh3kbp1Q8R550 Gm9847-201ENSMUST00000052528 599 ntBASIC21.36■■□□□ 1.01
Sh3kbp1Q8R550 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sh3kbp1Q8R550 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.36■■□□□ 1.01
Sh3kbp1Q8R550 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.35■■□□□ 1.01
Sh3kbp1Q8R550 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3kbp1Q8R550 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3kbp1Q8R550 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3kbp1Q8R550 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.35■■□□□ 1.01
Sh3kbp1Q8R550 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3kbp1Q8R550 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.35■■□□□ 1.01
Sh3kbp1Q8R550 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3kbp1Q8R550 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3kbp1Q8R550 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sh3kbp1Q8R550 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Sh3kbp1Q8R550 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3kbp1Q8R550 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sh3kbp1Q8R550 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Sh3kbp1Q8R550 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.33■■□□□ 1.01
Sh3kbp1Q8R550 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3kbp1Q8R550 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3kbp1Q8R550 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3kbp1Q8R550 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3kbp1Q8R550 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sh3kbp1Q8R550 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sh3kbp1Q8R550 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Sh3kbp1Q8R550 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3kbp1Q8R550 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3kbp1Q8R550 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3kbp1Q8R550 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3kbp1Q8R550 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Sh3kbp1Q8R550 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sh3kbp1Q8R550 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Sh3kbp1Q8R550 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3kbp1Q8R550 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sh3kbp1Q8R550 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3kbp1Q8R550 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3kbp1Q8R550 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3kbp1Q8R550 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sh3kbp1Q8R550 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sh3kbp1Q8R550 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sh3kbp1Q8R550 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3kbp1Q8R550 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sh3kbp1Q8R550 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.3■■□□□ 1
Sh3kbp1Q8R550 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sh3kbp1Q8R550 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.3■■□□□ 1
Sh3kbp1Q8R550 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sh3kbp1Q8R550 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3kbp1Q8R550 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3kbp1Q8R550 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3kbp1Q8R550 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3kbp1Q8R550 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Sh3kbp1Q8R550 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3kbp1Q8R550 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3kbp1Q8R550 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sh3kbp1Q8R550 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sh3kbp1Q8R550 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.27■■□□□ 1
Sh3kbp1Q8R550 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3kbp1Q8R550 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms