Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cacnb1Q8R3Z5 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Cacnb1Q8R3Z5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.08■■□□□ 1.29
Cacnb1Q8R3Z5 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.08■■□□□ 1.29
Cacnb1Q8R3Z5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Cacnb1Q8R3Z5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cacnb1Q8R3Z5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Cacnb1Q8R3Z5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cacnb1Q8R3Z5 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.07■■□□□ 1.28
Cacnb1Q8R3Z5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cacnb1Q8R3Z5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cacnb1Q8R3Z5 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.07■■□□□ 1.28
Cacnb1Q8R3Z5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cacnb1Q8R3Z5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cacnb1Q8R3Z5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cacnb1Q8R3Z5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cacnb1Q8R3Z5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cacnb1Q8R3Z5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.06■■□□□ 1.28
Cacnb1Q8R3Z5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cacnb1Q8R3Z5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cacnb1Q8R3Z5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cacnb1Q8R3Z5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Cacnb1Q8R3Z5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cacnb1Q8R3Z5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cacnb1Q8R3Z5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cacnb1Q8R3Z5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.05■■□□□ 1.28
Cacnb1Q8R3Z5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.05■■□□□ 1.28
Cacnb1Q8R3Z5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
Cacnb1Q8R3Z5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cacnb1Q8R3Z5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Cacnb1Q8R3Z5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cacnb1Q8R3Z5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cacnb1Q8R3Z5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cacnb1Q8R3Z5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
Cacnb1Q8R3Z5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.04■■□□□ 1.28
Cacnb1Q8R3Z5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cacnb1Q8R3Z5 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cacnb1Q8R3Z5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cacnb1Q8R3Z5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cacnb1Q8R3Z5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cacnb1Q8R3Z5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cacnb1Q8R3Z5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.03■■□□□ 1.28
Cacnb1Q8R3Z5 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC23.03■■□□□ 1.28
Cacnb1Q8R3Z5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cacnb1Q8R3Z5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Cacnb1Q8R3Z5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cacnb1Q8R3Z5 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.02■■□□□ 1.28
Cacnb1Q8R3Z5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Cacnb1Q8R3Z5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cacnb1Q8R3Z5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cacnb1Q8R3Z5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cacnb1Q8R3Z5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cacnb1Q8R3Z5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cacnb1Q8R3Z5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cacnb1Q8R3Z5 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.01■■□□□ 1.27
Cacnb1Q8R3Z5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cacnb1Q8R3Z5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.01■■□□□ 1.27
Cacnb1Q8R3Z5 Gm10399-202ENSMUST00000202768 748 ntBASIC23.01■■□□□ 1.27
Cacnb1Q8R3Z5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cacnb1Q8R3Z5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cacnb1Q8R3Z5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cacnb1Q8R3Z5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Gm5131-201ENSMUST00000212776 1238 ntBASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Gm9959-201ENSMUST00000068277 390 ntBASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cacnb1Q8R3Z5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cacnb1Q8R3Z5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cacnb1Q8R3Z5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cacnb1Q8R3Z5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.99■■□□□ 1.27
Cacnb1Q8R3Z5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cacnb1Q8R3Z5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cacnb1Q8R3Z5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cacnb1Q8R3Z5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cacnb1Q8R3Z5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cacnb1Q8R3Z5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cacnb1Q8R3Z5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Cacnb1Q8R3Z5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Cacnb1Q8R3Z5 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Cacnb1Q8R3Z5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.97■■□□□ 1.27
Cacnb1Q8R3Z5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cacnb1Q8R3Z5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cacnb1Q8R3Z5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.96■■□□□ 1.27
Cacnb1Q8R3Z5 Gm40881-201ENSMUST00000223397 166 ntBASIC22.96■■□□□ 1.27
Cacnb1Q8R3Z5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cacnb1Q8R3Z5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.96■■□□□ 1.27
Cacnb1Q8R3Z5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cacnb1Q8R3Z5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cacnb1Q8R3Z5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Cacnb1Q8R3Z5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Cacnb1Q8R3Z5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 160.9 ms