Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sf3a1Q8K4Z5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Sf3a1Q8K4Z5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
Sf3a1Q8K4Z5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Sf3a1Q8K4Z5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC25.45■■□□□ 1.66
Sf3a1Q8K4Z5 Gm14117-201ENSMUST00000122417 843 ntBASIC25.45■■□□□ 1.66
Sf3a1Q8K4Z5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.45■■□□□ 1.66
Sf3a1Q8K4Z5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Sf3a1Q8K4Z5 Gm43403-201ENSMUST00000198011 1786 ntBASIC25.45■■□□□ 1.66
Sf3a1Q8K4Z5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Sf3a1Q8K4Z5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Sf3a1Q8K4Z5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sf3a1Q8K4Z5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sf3a1Q8K4Z5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Sf3a1Q8K4Z5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sf3a1Q8K4Z5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Sf3a1Q8K4Z5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.44■■□□□ 1.66
Sf3a1Q8K4Z5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Sf3a1Q8K4Z5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Sf3a1Q8K4Z5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Sf3a1Q8K4Z5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Sf3a1Q8K4Z5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sf3a1Q8K4Z5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sf3a1Q8K4Z5 Gm7417-201ENSMUST00000192950 473 ntBASIC25.42■■□□□ 1.66
Sf3a1Q8K4Z5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.42■■□□□ 1.66
Sf3a1Q8K4Z5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sf3a1Q8K4Z5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sf3a1Q8K4Z5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sf3a1Q8K4Z5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Sf3a1Q8K4Z5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sf3a1Q8K4Z5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sf3a1Q8K4Z5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Sf3a1Q8K4Z5 Gm32051-202ENSMUST00000197905 2385 ntBASIC25.41■■□□□ 1.66
Sf3a1Q8K4Z5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sf3a1Q8K4Z5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Sf3a1Q8K4Z5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Sf3a1Q8K4Z5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sf3a1Q8K4Z5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC25.4■■□□□ 1.66
Sf3a1Q8K4Z5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sf3a1Q8K4Z5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sf3a1Q8K4Z5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sf3a1Q8K4Z5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Sf3a1Q8K4Z5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC25.39■■□□□ 1.66
Sf3a1Q8K4Z5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25.39■■□□□ 1.66
Sf3a1Q8K4Z5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sf3a1Q8K4Z5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC25.39■■□□□ 1.66
Sf3a1Q8K4Z5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
Sf3a1Q8K4Z5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.39■■□□□ 1.66
Sf3a1Q8K4Z5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sf3a1Q8K4Z5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC25.39■■□□□ 1.65
Sf3a1Q8K4Z5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sf3a1Q8K4Z5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.38■■□□□ 1.65
Sf3a1Q8K4Z5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sf3a1Q8K4Z5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC25.37■■□□□ 1.65
Sf3a1Q8K4Z5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Sf3a1Q8K4Z5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sf3a1Q8K4Z5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sf3a1Q8K4Z5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Sf3a1Q8K4Z5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Sf3a1Q8K4Z5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC25.36■■□□□ 1.65
Sf3a1Q8K4Z5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sf3a1Q8K4Z5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Sf3a1Q8K4Z5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC25.36■■□□□ 1.65
Sf3a1Q8K4Z5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC25.36■■□□□ 1.65
Sf3a1Q8K4Z5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sf3a1Q8K4Z5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sf3a1Q8K4Z5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC25.36■■□□□ 1.65
Sf3a1Q8K4Z5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sf3a1Q8K4Z5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Sf3a1Q8K4Z5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sf3a1Q8K4Z5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Sf3a1Q8K4Z5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sf3a1Q8K4Z5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC25.35■■□□□ 1.65
Sf3a1Q8K4Z5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sf3a1Q8K4Z5 Gm6277-202ENSMUST00000224036 2779 ntBASIC25.34■■□□□ 1.65
Sf3a1Q8K4Z5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Sf3a1Q8K4Z5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Sf3a1Q8K4Z5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC25.34■■□□□ 1.65
Sf3a1Q8K4Z5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sf3a1Q8K4Z5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sf3a1Q8K4Z5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sf3a1Q8K4Z5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Sf3a1Q8K4Z5 Gm13042-201ENSMUST00000119244 1955 ntBASIC25.33■■□□□ 1.64
Sf3a1Q8K4Z5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Sf3a1Q8K4Z5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sf3a1Q8K4Z5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sf3a1Q8K4Z5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Sf3a1Q8K4Z5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.32■■□□□ 1.64
Sf3a1Q8K4Z5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Sf3a1Q8K4Z5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sf3a1Q8K4Z5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sf3a1Q8K4Z5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Sf3a1Q8K4Z5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sf3a1Q8K4Z5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sf3a1Q8K4Z5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sf3a1Q8K4Z5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sf3a1Q8K4Z5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sf3a1Q8K4Z5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC25.3■■□□□ 1.64
Sf3a1Q8K4Z5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Sf3a1Q8K4Z5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms