Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Gm26571-201ENSMUST00000181399 666 ntBASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Gm43017-201ENSMUST00000198296 752 ntBASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Alms1Q8K4E0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alms1Q8K4E0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Alms1Q8K4E0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alms1Q8K4E0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Alms1Q8K4E0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alms1Q8K4E0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Alms1Q8K4E0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Alms1Q8K4E0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Alms1Q8K4E0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Alms1Q8K4E0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Alms1Q8K4E0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.52■□□□□ 0.87
Alms1Q8K4E0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Alms1Q8K4E0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Alms1Q8K4E0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.51■□□□□ 0.87
Alms1Q8K4E0 Gm43137-201ENSMUST00000198052 594 ntBASIC20.51■□□□□ 0.87
Alms1Q8K4E0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Alms1Q8K4E0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.51■□□□□ 0.87
Alms1Q8K4E0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Alms1Q8K4E0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Alms1Q8K4E0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Alms1Q8K4E0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.5■□□□□ 0.87
Alms1Q8K4E0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Alms1Q8K4E0 Gm10849-201ENSMUST00000100397 618 ntBASIC20.5■□□□□ 0.87
Alms1Q8K4E0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Alms1Q8K4E0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Alms1Q8K4E0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Alms1Q8K4E0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alms1Q8K4E0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alms1Q8K4E0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alms1Q8K4E0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alms1Q8K4E0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Alms1Q8K4E0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alms1Q8K4E0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Gm5874-201ENSMUST00000096101 508 ntBASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.48■□□□□ 0.87
Alms1Q8K4E0 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.48■□□□□ 0.87
Alms1Q8K4E0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alms1Q8K4E0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.47■□□□□ 0.87
Alms1Q8K4E0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Alms1Q8K4E0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Alms1Q8K4E0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alms1Q8K4E0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Alms1Q8K4E0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
Alms1Q8K4E0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alms1Q8K4E0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alms1Q8K4E0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alms1Q8K4E0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.46■□□□□ 0.87
Alms1Q8K4E0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Alms1Q8K4E0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alms1Q8K4E0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Alms1Q8K4E0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.46■□□□□ 0.87
Alms1Q8K4E0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alms1Q8K4E0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.45■□□□□ 0.86
Alms1Q8K4E0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alms1Q8K4E0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms