Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Depdc1aQ8CIG0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Depdc1aQ8CIG0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.65■■□□□ 1.38
Depdc1aQ8CIG0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Depdc1aQ8CIG0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.65■■□□□ 1.38
Depdc1aQ8CIG0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Depdc1aQ8CIG0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Depdc1aQ8CIG0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Depdc1aQ8CIG0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.64■■□□□ 1.37
Depdc1aQ8CIG0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.64■■□□□ 1.37
Depdc1aQ8CIG0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Depdc1aQ8CIG0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Depdc1aQ8CIG0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Depdc1aQ8CIG0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Depdc1aQ8CIG0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Depdc1aQ8CIG0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Depdc1aQ8CIG0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
Depdc1aQ8CIG0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Depdc1aQ8CIG0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Depdc1aQ8CIG0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Depdc1aQ8CIG0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Depdc1aQ8CIG0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Depdc1aQ8CIG0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Depdc1aQ8CIG0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.61■■□□□ 1.37
Depdc1aQ8CIG0 Gm7143-201ENSMUST00000222811 859 ntBASIC23.61■■□□□ 1.37
Depdc1aQ8CIG0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Depdc1aQ8CIG0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Depdc1aQ8CIG0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Depdc1aQ8CIG0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Depdc1aQ8CIG0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.6■■□□□ 1.37
Depdc1aQ8CIG0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC23.6■■□□□ 1.37
Depdc1aQ8CIG0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
Depdc1aQ8CIG0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Depdc1aQ8CIG0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Depdc1aQ8CIG0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Depdc1aQ8CIG0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Depdc1aQ8CIG0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Depdc1aQ8CIG0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Depdc1aQ8CIG0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
Depdc1aQ8CIG0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Depdc1aQ8CIG0 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.58■■□□□ 1.37
Depdc1aQ8CIG0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Depdc1aQ8CIG0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Depdc1aQ8CIG0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Depdc1aQ8CIG0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Depdc1aQ8CIG0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
Depdc1aQ8CIG0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Depdc1aQ8CIG0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Depdc1aQ8CIG0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Depdc1aQ8CIG0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Depdc1aQ8CIG0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Depdc1aQ8CIG0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.36
Depdc1aQ8CIG0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Depdc1aQ8CIG0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Depdc1aQ8CIG0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.57■■□□□ 1.36
Depdc1aQ8CIG0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Depdc1aQ8CIG0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Depdc1aQ8CIG0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Depdc1aQ8CIG0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Depdc1aQ8CIG0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC23.56■■□□□ 1.36
Depdc1aQ8CIG0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Depdc1aQ8CIG0 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.56■■□□□ 1.36
Depdc1aQ8CIG0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Depdc1aQ8CIG0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Depdc1aQ8CIG0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Depdc1aQ8CIG0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Depdc1aQ8CIG0 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.55■■□□□ 1.36
Depdc1aQ8CIG0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Depdc1aQ8CIG0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Depdc1aQ8CIG0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Depdc1aQ8CIG0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Depdc1aQ8CIG0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.55■■□□□ 1.36
Depdc1aQ8CIG0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
Depdc1aQ8CIG0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Depdc1aQ8CIG0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Depdc1aQ8CIG0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Depdc1aQ8CIG0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Depdc1aQ8CIG0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Depdc1aQ8CIG0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Depdc1aQ8CIG0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
Depdc1aQ8CIG0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Depdc1aQ8CIG0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Depdc1aQ8CIG0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.53■■□□□ 1.36
Depdc1aQ8CIG0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
Depdc1aQ8CIG0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Depdc1aQ8CIG0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Depdc1aQ8CIG0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms