Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip4Q8CI96 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip4Q8CI96 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip4Q8CI96 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip4Q8CI96 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip4Q8CI96 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip4Q8CI96 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip4Q8CI96 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Clip4Q8CI96 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip4Q8CI96 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.8■□□□□ 0.92
Clip4Q8CI96 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.8■□□□□ 0.92
Clip4Q8CI96 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip4Q8CI96 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip4Q8CI96 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip4Q8CI96 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip4Q8CI96 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Clip4Q8CI96 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Clip4Q8CI96 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Clip4Q8CI96 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.79■□□□□ 0.92
Clip4Q8CI96 Gm10232-201ENSMUST00000089221 720 ntBASIC20.79■□□□□ 0.92
Clip4Q8CI96 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Clip4Q8CI96 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Clip4Q8CI96 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip4Q8CI96 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip4Q8CI96 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip4Q8CI96 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip4Q8CI96 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip4Q8CI96 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip4Q8CI96 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip4Q8CI96 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip4Q8CI96 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip4Q8CI96 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clip4Q8CI96 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip4Q8CI96 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip4Q8CI96 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.78■□□□□ 0.92
Clip4Q8CI96 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip4Q8CI96 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip4Q8CI96 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip4Q8CI96 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.77■□□□□ 0.92
Clip4Q8CI96 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.77■□□□□ 0.92
Clip4Q8CI96 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip4Q8CI96 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.77■□□□□ 0.92
Clip4Q8CI96 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.77■□□□□ 0.92
Clip4Q8CI96 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip4Q8CI96 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip4Q8CI96 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
Clip4Q8CI96 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clip4Q8CI96 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip4Q8CI96 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip4Q8CI96 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.76■□□□□ 0.91
Clip4Q8CI96 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip4Q8CI96 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clip4Q8CI96 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip4Q8CI96 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.76■□□□□ 0.91
Clip4Q8CI96 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip4Q8CI96 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip4Q8CI96 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clip4Q8CI96 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip4Q8CI96 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clip4Q8CI96 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.76■□□□□ 0.91
Clip4Q8CI96 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip4Q8CI96 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Clip4Q8CI96 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.75■□□□□ 0.91
Clip4Q8CI96 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Clip4Q8CI96 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip4Q8CI96 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Clip4Q8CI96 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip4Q8CI96 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip4Q8CI96 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip4Q8CI96 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clip4Q8CI96 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.74■□□□□ 0.91
Clip4Q8CI96 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip4Q8CI96 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip4Q8CI96 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Clip4Q8CI96 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clip4Q8CI96 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.73■□□□□ 0.91
Clip4Q8CI96 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip4Q8CI96 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip4Q8CI96 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip4Q8CI96 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Clip4Q8CI96 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip4Q8CI96 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip4Q8CI96 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.72■□□□□ 0.91
Clip4Q8CI96 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip4Q8CI96 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip4Q8CI96 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clip4Q8CI96 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Clip4Q8CI96 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clip4Q8CI96 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip4Q8CI96 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip4Q8CI96 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip4Q8CI96 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Clip4Q8CI96 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip4Q8CI96 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clip4Q8CI96 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clip4Q8CI96 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clip4Q8CI96 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Clip4Q8CI96 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Clip4Q8CI96 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clip4Q8CI96 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms