Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Mmp28Q8CGV8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp28Q8CGV8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp28Q8CGV8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Mmp28Q8CGV8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Mmp28Q8CGV8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp28Q8CGV8 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.59■□□□□ 0.41
Mmp28Q8CGV8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.58■□□□□ 0.41
Mmp28Q8CGV8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Mmp28Q8CGV8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp28Q8CGV8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp28Q8CGV8 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.58■□□□□ 0.4
Mmp28Q8CGV8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp28Q8CGV8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Mmp28Q8CGV8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp28Q8CGV8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp28Q8CGV8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp28Q8CGV8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp28Q8CGV8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp28Q8CGV8 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.57■□□□□ 0.4
Mmp28Q8CGV8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp28Q8CGV8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp28Q8CGV8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp28Q8CGV8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp28Q8CGV8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp28Q8CGV8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp28Q8CGV8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Gm6311-201ENSMUST00000073790 878 ntBASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp28Q8CGV8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp28Q8CGV8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.55■□□□□ 0.4
Mmp28Q8CGV8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp28Q8CGV8 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.55■□□□□ 0.4
Mmp28Q8CGV8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp28Q8CGV8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp28Q8CGV8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp28Q8CGV8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp28Q8CGV8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp28Q8CGV8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp28Q8CGV8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Mmp28Q8CGV8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp28Q8CGV8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Mmp28Q8CGV8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp28Q8CGV8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Mmp28Q8CGV8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp28Q8CGV8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp28Q8CGV8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp28Q8CGV8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp28Q8CGV8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.53■□□□□ 0.4
Mmp28Q8CGV8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.53■□□□□ 0.4
Mmp28Q8CGV8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp28Q8CGV8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.53■□□□□ 0.4
Mmp28Q8CGV8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.53■□□□□ 0.4
Mmp28Q8CGV8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp28Q8CGV8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp28Q8CGV8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp28Q8CGV8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp28Q8CGV8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.52■□□□□ 0.4
Mmp28Q8CGV8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp28Q8CGV8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.52■□□□□ 0.4
Mmp28Q8CGV8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Mmp28Q8CGV8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp28Q8CGV8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.52■□□□□ 0.39
Mmp28Q8CGV8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp28Q8CGV8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp28Q8CGV8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp28Q8CGV8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp28Q8CGV8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp28Q8CGV8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Mmp28Q8CGV8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp28Q8CGV8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp28Q8CGV8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.51■□□□□ 0.39
Mmp28Q8CGV8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp28Q8CGV8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp28Q8CGV8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp28Q8CGV8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp28Q8CGV8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp28Q8CGV8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp28Q8CGV8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp28Q8CGV8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Mmp28Q8CGV8 Terc-201ENSMUST00000082862 423 ntBASIC17.5■□□□□ 0.39
Mmp28Q8CGV8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Mmp28Q8CGV8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp28Q8CGV8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp28Q8CGV8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Mmp28Q8CGV8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp28Q8CGV8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp28Q8CGV8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp28Q8CGV8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp28Q8CGV8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp28Q8CGV8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms