Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Q8CD60 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Q8CD60 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Q8CD60 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q8CD60 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q8CD60 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q8CD60 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.88■■□□□ 1.09
Q8CD60 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Q8CD60 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.88■■□□□ 1.09
Q8CD60 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q8CD60 Gm40881-201ENSMUST00000223397 166 ntBASIC21.88■■□□□ 1.09
Q8CD60 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q8CD60 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q8CD60 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.88■■□□□ 1.09
Q8CD60 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q8CD60 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q8CD60 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q8CD60 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q8CD60 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q8CD60 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Q8CD60 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q8CD60 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.87■■□□□ 1.09
Q8CD60 Gm9959-201ENSMUST00000068277 390 ntBASIC21.87■■□□□ 1.09
Q8CD60 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Q8CD60 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q8CD60 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q8CD60 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q8CD60 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Q8CD60 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Q8CD60 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Q8CD60 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Q8CD60 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Q8CD60 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Q8CD60 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.85■■□□□ 1.09
Q8CD60 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Q8CD60 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Q8CD60 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.85■■□□□ 1.09
Q8CD60 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Q8CD60 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Q8CD60 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.84■■□□□ 1.09
Q8CD60 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Q8CD60 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Q8CD60 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Q8CD60 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Q8CD60 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Q8CD60 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.83■■□□□ 1.09
Q8CD60 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Q8CD60 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Q8CD60 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Q8CD60 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Q8CD60 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Q8CD60 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Q8CD60 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.82■■□□□ 1.08
Q8CD60 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Q8CD60 Etf1-202ENSMUST00000180351 108 ntBASIC21.82■■□□□ 1.08
Q8CD60 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Q8CD60 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Q8CD60 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Q8CD60 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.82■■□□□ 1.08
Q8CD60 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Q8CD60 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.81■■□□□ 1.08
Q8CD60 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Q8CD60 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q8CD60 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q8CD60 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Q8CD60 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.8■■□□□ 1.08
Q8CD60 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q8CD60 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q8CD60 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q8CD60 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Q8CD60 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Q8CD60 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.79■■□□□ 1.08
Q8CD60 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Q8CD60 Gm14117-201ENSMUST00000122417 843 ntBASIC21.79■■□□□ 1.08
Q8CD60 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.79■■□□□ 1.08
Q8CD60 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Q8CD60 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Q8CD60 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Q8CD60 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.78■■□□□ 1.08
Q8CD60 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Q8CD60 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Q8CD60 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Q8CD60 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Q8CD60 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Q8CD60 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Q8CD60 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Q8CD60 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.77■■□□□ 1.08
Q8CD60 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Q8CD60 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Q8CD60 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.77■■□□□ 1.07
Q8CD60 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Q8CD60 Gm45102-201ENSMUST00000207427 857 ntBASIC21.76■■□□□ 1.07
Q8CD60 Rps24-207ENSMUST00000224568 714 ntBASIC21.76■■□□□ 1.07
Q8CD60 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Q8CD60 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Q8CD60 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Q8CD60 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Q8CD60 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Q8CD60 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Q8CD60 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms