Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap54Q8C6S9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap54Q8C6S9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap54Q8C6S9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap54Q8C6S9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap54Q8C6S9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap54Q8C6S9 Gm8493-201ENSMUST00000196881 489 ntBASIC20.33■□□□□ 0.84
Cfap54Q8C6S9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap54Q8C6S9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cfap54Q8C6S9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap54Q8C6S9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap54Q8C6S9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cfap54Q8C6S9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.32■□□□□ 0.84
Cfap54Q8C6S9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.32■□□□□ 0.84
Cfap54Q8C6S9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cfap54Q8C6S9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap54Q8C6S9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap54Q8C6S9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.31■□□□□ 0.84
Cfap54Q8C6S9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap54Q8C6S9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cfap54Q8C6S9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap54Q8C6S9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap54Q8C6S9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap54Q8C6S9 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.3■□□□□ 0.84
Cfap54Q8C6S9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.3■□□□□ 0.84
Cfap54Q8C6S9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cfap54Q8C6S9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 Gm10493-201ENSMUST00000097270 612 ntBASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cfap54Q8C6S9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap54Q8C6S9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.28■□□□□ 0.84
Cfap54Q8C6S9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap54Q8C6S9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.28■□□□□ 0.84
Cfap54Q8C6S9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap54Q8C6S9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap54Q8C6S9 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.28■□□□□ 0.84
Cfap54Q8C6S9 Gm9870-201ENSMUST00000063874 645 ntBASIC20.28■□□□□ 0.84
Cfap54Q8C6S9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap54Q8C6S9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.28■□□□□ 0.84
Cfap54Q8C6S9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cfap54Q8C6S9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap54Q8C6S9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap54Q8C6S9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cfap54Q8C6S9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap54Q8C6S9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cfap54Q8C6S9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cfap54Q8C6S9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cfap54Q8C6S9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cfap54Q8C6S9 Gm42569-201ENSMUST00000200539 472 ntBASIC20.27■□□□□ 0.83
Cfap54Q8C6S9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap54Q8C6S9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap54Q8C6S9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap54Q8C6S9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.26■□□□□ 0.83
Cfap54Q8C6S9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap54Q8C6S9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cfap54Q8C6S9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cfap54Q8C6S9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.25■□□□□ 0.83
Cfap54Q8C6S9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cfap54Q8C6S9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cfap54Q8C6S9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cfap54Q8C6S9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.24■□□□□ 0.83
Cfap54Q8C6S9 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.24■□□□□ 0.83
Cfap54Q8C6S9 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.24■□□□□ 0.83
Cfap54Q8C6S9 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.24■□□□□ 0.83
Cfap54Q8C6S9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cfap54Q8C6S9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
Cfap54Q8C6S9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cfap54Q8C6S9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cfap54Q8C6S9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cfap54Q8C6S9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cfap54Q8C6S9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cfap54Q8C6S9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.23■□□□□ 0.83
Cfap54Q8C6S9 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.23■□□□□ 0.83
Cfap54Q8C6S9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.22■□□□□ 0.83
Cfap54Q8C6S9 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.22■□□□□ 0.83
Cfap54Q8C6S9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfap54Q8C6S9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cfap54Q8C6S9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfap54Q8C6S9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfap54Q8C6S9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cfap54Q8C6S9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfap54Q8C6S9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cfap54Q8C6S9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfap54Q8C6S9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap54Q8C6S9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfap54Q8C6S9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cfap54Q8C6S9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.21■□□□□ 0.83
Cfap54Q8C6S9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.21■□□□□ 0.83
Cfap54Q8C6S9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cfap54Q8C6S9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms