Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tsen54Q8C2A2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tsen54Q8C2A2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tsen54Q8C2A2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.25■□□□□ 0.35
Tsen54Q8C2A2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tsen54Q8C2A2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Tsen54Q8C2A2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tsen54Q8C2A2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tsen54Q8C2A2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.24■□□□□ 0.35
Tsen54Q8C2A2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.24■□□□□ 0.35
Tsen54Q8C2A2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tsen54Q8C2A2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tsen54Q8C2A2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tsen54Q8C2A2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Tsen54Q8C2A2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tsen54Q8C2A2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.23■□□□□ 0.35
Tsen54Q8C2A2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tsen54Q8C2A2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tsen54Q8C2A2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tsen54Q8C2A2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tsen54Q8C2A2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tsen54Q8C2A2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tsen54Q8C2A2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tsen54Q8C2A2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Tsen54Q8C2A2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tsen54Q8C2A2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Tsen54Q8C2A2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tsen54Q8C2A2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.21■□□□□ 0.35
Tsen54Q8C2A2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tsen54Q8C2A2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tsen54Q8C2A2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tsen54Q8C2A2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tsen54Q8C2A2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.2■□□□□ 0.34
Tsen54Q8C2A2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tsen54Q8C2A2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tsen54Q8C2A2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Tsen54Q8C2A2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Tsen54Q8C2A2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tsen54Q8C2A2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tsen54Q8C2A2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tsen54Q8C2A2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tsen54Q8C2A2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tsen54Q8C2A2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tsen54Q8C2A2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tsen54Q8C2A2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tsen54Q8C2A2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tsen54Q8C2A2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tsen54Q8C2A2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Tsen54Q8C2A2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tsen54Q8C2A2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tsen54Q8C2A2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tsen54Q8C2A2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tsen54Q8C2A2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tsen54Q8C2A2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tsen54Q8C2A2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tsen54Q8C2A2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tsen54Q8C2A2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tsen54Q8C2A2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Tsen54Q8C2A2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tsen54Q8C2A2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tsen54Q8C2A2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.17■□□□□ 0.34
Tsen54Q8C2A2 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.17■□□□□ 0.34
Tsen54Q8C2A2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.17■□□□□ 0.34
Tsen54Q8C2A2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tsen54Q8C2A2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Tsen54Q8C2A2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.17■□□□□ 0.34
Tsen54Q8C2A2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Tsen54Q8C2A2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tsen54Q8C2A2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tsen54Q8C2A2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tsen54Q8C2A2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tsen54Q8C2A2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.16■□□□□ 0.34
Tsen54Q8C2A2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tsen54Q8C2A2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tsen54Q8C2A2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tsen54Q8C2A2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tsen54Q8C2A2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tsen54Q8C2A2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Tsen54Q8C2A2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tsen54Q8C2A2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tsen54Q8C2A2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tsen54Q8C2A2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Tsen54Q8C2A2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tsen54Q8C2A2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tsen54Q8C2A2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Tsen54Q8C2A2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tsen54Q8C2A2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tsen54Q8C2A2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.13■□□□□ 0.33
Tsen54Q8C2A2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms